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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ecdB and edcC overlap by 1 nucleotides
edcC and ecdD are separated by 10 nucleotides
ecdD and pphB are separated by 40 nucleotides
pphB and mutS are separated by 105 nucleotides
MCAODC_11030: ecdB - putative UbiX-like flavin prenyltransferase, at 2,198,341 to 2,198,934
ecdB
MCAODC_11035: edcC - Phenolic acid decarboxylase, at 2,198,934 to 2,200,361
edcC
MCAODC_11040: ecdD - Protein EcdD, at 2,200,372 to 2,200,608
ecdD
MCAODC_11045: pphB - protein-serine/threonine phosphatase, at 2,200,649 to 2,201,305
pphB
MCAODC_11050: mutS - DNA mismatch repair protein MutS, at 2,201,411 to 2,203,972
mutS
Group
Condition
MCAODC
_11030
MCAODC
_11035
MCAODC
_11040
MCAODC
_11045
MCAODC
_11050
ecdB
edcC
ecdD
pphB
mutS
phage
WM_Bas41
-0.1
-0.1
+0.1
-0.8
-0.1
carbon source
Casamino-acids
-0.4
-0.0
-0.2
+0.4
-0.1
carbon source
D-Glucose
-0.1
-0.1
+0.2
-0.1
-0.0
no phage control
Control_ECRC101_WM
+0.0
-0.2
+0.3
-0.2
-0.1
phage
WM_EV240
-0.4
-0.2
-0.4
+0.9
-0.0
phage
EV240
-0.7
-0.1
+0.0
+0.8
-0.1
phage
WM_Bas09
+0.1
+0.3
-0.3
-0.0
-0.0
carbon source
L-Arabinose
-0.3
-0.1
+0.4
+0.1
-0.1
carbon source
D-Glucose
+0.1
+0.0
+0.0
+0.1
-0.1
phage
Bas09
-0.3
-0.3
-0.1
+0.9
-0.0
phage
WM_Bas14
+0.1
-0.2
-0.1
+0.5
-0.1
carbon source
L-Arabinose
-0.2
+0.0
+0.2
+0.3
-0.1
phage
WM_Bas09
+0.3
-0.2
+0.2
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.0
+0.0
+0.7
-0.1
carbon source
Casamino-acids
-0.6
+0.2
+0.3
+0.7
-0.0
phage
TP9
-0.3
-0.2
-0.0
+1.2
+0.1
phage
WM_TP9
-0.1
+0.0
+0.0
+0.8
+0.1
phage
EV240
-0.3
+0.1
+0.0
+1.0
+0.0
phage
WM_EV240
-0.2
+0.1
+0.6
+0.5
-0.1
phage
Bas09
+0.3
-0.3
+0.2
+0.9
-0.2
phage
WM_TP9
+0.1
-0.0
+0.1
+0.8
+0.1
no phage control
Control_ECRC101_WM
+0.4
-0.2
+0.1
+0.7
+0.0
phage
WM_RB68
+0.5
+0.1
-0.4
+0.9
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.2
+0.1
+1.1
-0.1
phage
Bas14
+0.3
-0.1
+0.1
+1.3
-0.1
phage
Bas14
-0.1
-0.1
+0.3
+1.6
-0.0
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