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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ygcS and ygcR overlap by 23 nucleotides
ygcR and fixB overlap by 4 nucleotides
fixB and MCAODC_10870 are separated by 15 nucleotides
MCAODC_10870 and ygcP are separated by 147 nucleotides
MCAODC_10855: ygcS - Inner membrane metabolite transport protein YgcS, at 2,167,940 to 2,168,146
ygcS
MCAODC_10860: ygcR - Putative electron transfer flavoprotein subunit YgcR, at 2,168,124 to 2,168,903
ygcR
MCAODC_10865: fixB - electron transfer flavoprotein, at 2,168,900 to 2,169,469
fixB
MCAODC_10870: MCAODC_10870 - Electron transfer flavoprotein subunit YgcQ, at 2,169,485 to 2,169,760
_10870
MCAODC_10875: ygcP - Uncharacterized protein YgcP, at 2,169,908 to 2,170,483
ygcP
Group
Condition
MCAODC
_10855
MCAODC
_10860
MCAODC
_10865
MCAODC
_10870
MCAODC
_10875
ygcS
ygcR
fixB
ygcP
phage
EV240
-0.2
-1.1
-0.5
+0.7
+0.0
carbon source
L-Arabinose
-0.3
-0.3
-0.3
-0.0
+0.2
carbon source
D-Glucose
-0.1
-0.3
+0.0
-0.2
-0.0
carbon source
D-Glucose
-0.1
-0.2
-0.5
-0.0
+0.2
phage
WM_Bas41
+0.0
-0.6
-0.0
-0.0
+0.0
phage
WM_EV240
+0.2
+0.0
-0.1
-0.1
-0.5
carbon source
L-Arabinose
-0.2
-0.1
-0.0
+0.0
-0.1
phage
WM_Bas09
+0.0
-0.1
+0.1
-0.3
-0.0
phage
Bas09
+0.2
-0.5
-0.2
+0.2
+0.0
carbon source
Casamino-acids
-0.2
+0.0
-0.2
+0.3
-0.3
phage
TP9
-0.2
-0.2
-0.1
+0.2
+0.1
phage
Bas14
-0.2
-0.5
-0.1
+0.7
-0.0
phage
WM_TP9
+0.3
-0.2
-0.2
+0.2
-0.1
phage
WM_EV240
+0.4
-0.0
-0.4
+0.5
-0.4
carbon source
Sodium-DL-Lactate
-0.0
+0.3
-0.2
-0.1
+0.0
phage
WM_TP9
+0.1
+0.1
-0.1
-0.1
-0.0
phage
WM_RB68
+0.3
-0.3
-0.1
+0.1
-0.0
phage
WM_Bas14
-0.1
+0.1
-0.2
+0.0
+0.2
carbon source
Sodium-DL-Lactate
-0.3
-0.2
+0.1
+0.1
+0.3
phage
WM_Bas09
+0.3
+0.0
+0.1
-0.5
+0.3
phage
Bas09
+0.2
+0.1
-0.3
+0.4
-0.1
phage
Bas14
+0.4
-0.3
-0.1
+0.3
-0.1
no phage control
Control_ECRC101_WM
+0.2
-0.2
+0.1
+0.2
+0.1
phage
EV240
+0.3
-0.4
-0.1
+0.5
+0.1
no phage control
Control_ECRC101_WM
+0.2
-0.0
+0.2
+0.1
+0.1
carbon source
Casamino-acids
+0.1
-0.0
+0.3
+0.5
-0.0
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