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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
sdaC and ppnN are separated by 556 nucleotides
ppnN and queF are separated by 111 nucleotides
queF and syd are separated by 67 nucleotides
syd and MCAODC_10730 are separated by 621 nucleotides
MCAODC_10705: sdaC - HAAAP family serine/threonine permease SdaC, at 2,132,879 to 2,134,168
sdaC
MCAODC_10710: ppnN - nucleotide 5'-monophosphate nucleosidase, at 2,134,725 to 2,136,089
ppnN
MCAODC_10715: queF - NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, at 2,136,201 to 2,137,049
queF
MCAODC_10720: syd - SecY-interacting protein, at 2,137,117 to 2,137,662
syd
MCAODC_10730: MCAODC_10730 - tRNA pseudouridine synthase C, at 2,138,284 to 2,138,613
_10730
Group
Condition
MCAODC
_10705
MCAODC
_10710
MCAODC
_10715
MCAODC
_10720
MCAODC
_10730
sdaC
ppnN
queF
syd
phage
WM_EV240
+0.3
+0.1
-0.2
-0.3
-0.1
phage
Bas14
+0.5
-0.1
+0.1
-0.2
-0.3
phage
WM_Bas14
+0.1
-0.1
-0.0
-0.2
+0.0
carbon source
Casamino-acids
-0.2
-0.1
-0.3
+0.2
+0.3
carbon source
Sodium-DL-Lactate
-0.2
+0.1
-0.2
+0.1
+0.0
phage
WM_EV240
-0.4
+0.1
-0.1
+0.4
-0.1
phage
WM_RB68
-0.2
-0.0
+0.1
+0.2
-0.1
phage
WM_TP9
-0.0
+0.0
+0.1
-0.1
-0.1
carbon source
D-Glucose
-0.0
+0.1
+0.1
+0.2
-0.5
carbon source
Sodium-DL-Lactate
-0.1
+0.0
+0.0
-0.1
+0.1
phage
TP9
+0.1
-0.1
-0.1
+0.0
+0.1
carbon source
L-Arabinose
-0.0
+0.2
+0.1
-0.1
-0.2
phage
WM_Bas41
+0.0
-0.0
-0.1
-0.0
+0.2
phage
WM_TP9
+0.3
+0.1
-0.3
-0.1
+0.2
no phage control
Control_ECRC101_WM
+0.2
+0.1
+0.2
-0.2
-0.2
carbon source
D-Glucose
-0.1
+0.1
+0.2
-0.0
+0.0
phage
WM_Bas09
+0.3
+0.0
-0.2
-0.0
+0.1
carbon source
L-Arabinose
-0.1
+0.1
-0.1
-0.0
+0.2
carbon source
Casamino-acids
-0.3
+0.4
-0.1
+0.2
+0.1
phage
Bas14
+0.4
-0.1
-0.0
+0.1
-0.2
phage
WM_Bas09
+0.4
+0.1
-0.2
-0.1
+0.1
phage
EV240
+0.4
-0.1
-0.1
-0.2
+0.3
no phage control
Control_ECRC101_WM
+0.1
-0.0
+0.0
-0.0
+0.1
phage
Bas09
+0.3
-0.2
+0.1
-0.1
+0.3
phage
EV240
+0.6
-0.3
-0.2
+0.3
+0.0
phage
Bas09
+1.4
+0.0
-0.1
+0.1
-0.2
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