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Cofit
Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ygfK and mocA are separated by 321 nucleotides
mocA and yqeC are separated by 102 nucleotides
yqeC and yqeB are separated by 47 nucleotides
yqeB and arcC are separated by 40 nucleotides
MCAODC_10175: ygfK - putative selenate reductase subunit YgfK, at 2,027,488 to 2,030,586
ygfK
MCAODC_10180: mocA - molybdenum cofactor cytidylyltransferase, at 2,030,908 to 2,031,486
mocA
MCAODC_10185: yqeC - selenium cofactor biosynthesis protein YqeC, at 2,031,589 to 2,032,359
yqeC
MCAODC_10190: yqeB - selenium-dependent molybdenum cofactor biosynthesis protein YqeB, at 2,032,407 to 2,034,032
yqeB
MCAODC_10195: arcC - carbamate kinase, at 2,034,073 to 2,035,005
arcC
Group
Condition
MCAODC
_10175
MCAODC
_10180
MCAODC
_10185
MCAODC
_10190
MCAODC
_10195
ygfK
mocA
yqeC
yqeB
arcC
carbon source
L-Arabinose
+0.0
-0.3
-0.0
-0.0
-0.1
phage
EV240
+0.0
-0.2
-0.0
-0.1
-0.0
carbon source
Casamino-acids
+0.0
-0.5
+0.1
-0.0
+0.1
phage
WM_Bas41
-0.0
+0.0
-0.1
-0.0
-0.1
no phage control
Control_ECRC101_WM
-0.0
+0.0
-0.2
-0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.1
+0.0
+0.2
-0.2
phage
Bas14
+0.0
-0.0
-0.1
+0.1
-0.1
phage
Bas09
-0.1
+0.3
+0.0
+0.1
-0.4
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.0
+0.1
-0.1
phage
WM_EV240
-0.0
+0.2
-0.3
+0.2
-0.1
carbon source
L-Arabinose
+0.1
+0.0
+0.1
+0.0
-0.0
phage
WM_TP9
+0.0
+0.2
-0.1
-0.0
+0.1
phage
WM_RB68
+0.1
+0.1
-0.1
-0.1
+0.2
carbon source
D-Glucose
-0.1
+0.3
+0.0
-0.0
-0.0
carbon source
D-Glucose
-0.0
+0.1
+0.1
+0.2
-0.1
phage
Bas09
+0.0
+0.3
-0.0
+0.0
-0.0
phage
WM_Bas09
+0.1
+0.1
-0.0
+0.1
+0.1
phage
Bas14
-0.0
+0.1
+0.1
+0.1
-0.0
phage
WM_EV240
+0.0
+0.2
+0.1
+0.0
-0.0
no phage control
Control_ECRC101_WM
-0.0
+0.5
+0.1
-0.0
-0.2
phage
TP9
-0.1
+0.2
+0.2
+0.1
+0.0
carbon source
Casamino-acids
+0.1
+0.4
+0.1
+0.0
-0.1
phage
WM_Bas14
+0.1
+0.1
+0.1
+0.1
+0.2
phage
WM_TP9
+0.0
+0.3
+0.0
+0.0
+0.1
phage
WM_Bas09
+0.1
+0.1
+0.2
-0.1
+0.2
phage
EV240
+0.1
+0.3
+0.3
-0.0
-0.1
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