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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
scpA and argP are separated by 203 nucleotides
argP and rpiA are separated by 382 nucleotides
rpiA and serA are separated by 254 nucleotides
serA and MCAODC_09990 are separated by 228 nucleotides
MCAODC_09965: scpA - methylmalonyl-CoA mutase, at 1,984,327 to 1,986,471
scpA
MCAODC_09970: argP - DNA-binding transcriptional regulator ArgP, at 1,986,675 to 1,987,568
argP
MCAODC_09975: rpiA - ribose-5-phosphate isomerase RpiA, at 1,987,951 to 1,988,610
rpiA
MCAODC_09980: serA - phosphoglycerate dehydrogenase, at 1,988,865 to 1,990,097
serA
MCAODC_09990: MCAODC_09990 - Type I toxin-antitoxin system Ibs family toxin, at 1,990,326 to 1,990,385
_09990
Group
Condition
MCAODC
_09965
MCAODC
_09970
MCAODC
_09975
MCAODC
_09980
MCAODC
_09990
scpA
argP
rpiA
serA
carbon source
L-Arabinose
+0.0
-0.6
N.D.
-6.6
-0.8
carbon source
D-Glucose
-0.1
-0.4
N.D.
-6.5
-0.0
carbon source
Sodium-DL-Lactate
-0.1
+0.1
N.D.
-6.6
-0.3
carbon source
D-Glucose
+0.1
+0.0
N.D.
-6.0
-0.3
carbon source
L-Arabinose
+0.0
-0.8
N.D.
-5.4
+0.1
phage
WM_Bas41
+0.0
+0.3
N.D.
-2.8
-2.6
phage
WM_TP9
+0.1
+0.2
N.D.
-5.4
+0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.7
N.D.
-6.1
+0.7
phage
WM_EV240
+0.1
-1.8
N.D.
-2.6
+0.2
phage
WM_Bas09
+0.1
-0.0
N.D.
-3.2
-0.9
phage
WM_TP9
-0.0
+0.6
N.D.
-5.1
+0.5
no phage control
Control_ECRC101_WM
+0.0
-0.3
N.D.
-2.9
-0.4
no phage control
Control_ECRC101_WM
+0.1
+0.4
N.D.
-3.4
+0.2
phage
WM_Bas09
+0.0
+0.2
N.D.
-2.8
-0.1
phage
WM_Bas14
+0.1
+0.5
N.D.
-2.6
-0.4
phage
Bas14
+0.1
-2.0
N.D.
-0.1
+0.2
phage
WM_EV240
-0.1
+1.2
N.D.
-2.7
+0.0
phage
WM_RB68
+0.0
+0.4
N.D.
-1.6
-0.0
phage
Bas09
-0.1
-0.9
N.D.
+0.1
-0.1
phage
TP9
+0.1
-1.3
N.D.
+0.2
+0.2
phage
EV240
-0.0
+0.7
N.D.
+0.1
-1.1
phage
Bas14
+0.2
-1.0
N.D.
+0.1
+0.5
carbon source
Casamino-acids
+0.1
-0.3
N.D.
-0.2
+0.1
phage
Bas09
+0.0
-0.4
N.D.
+0.2
+0.5
carbon source
Casamino-acids
-0.1
+0.8
N.D.
-0.0
+0.0
phage
EV240
-0.1
+0.6
N.D.
+0.2
+0.1
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