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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
rsmE and endA are separated by 79 nucleotides
endA and sprT are separated by 94 nucleotides
sprT and galP are separated by 118 nucleotides
galP and metK are separated by 436 nucleotides
MCAODC_09800: rsmE - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 1,951,433 to 1,952,164
rsmE
MCAODC_09805: endA - deoxyribonuclease I, at 1,952,244 to 1,952,951
endA
MCAODC_09810: sprT - SprT family zinc-dependent metalloprotease, at 1,953,046 to 1,953,501
sprT
MCAODC_09815: galP - galactose/proton symporter, at 1,953,620 to 1,955,014
galP
MCAODC_09820: metK - methionine adenosyltransferase, at 1,955,451 to 1,956,605
metK
Group
Condition
MCAODC
_09800
MCAODC
_09805
MCAODC
_09810
MCAODC
_09815
MCAODC
_09820
rsmE
endA
sprT
galP
metK
phage
Bas09
-0.4
-0.9
-0.1
-0.0
N.D.
phage
Bas09
+0.1
-0.6
-0.1
-0.0
N.D.
phage
EV240
+0.0
-0.2
-0.2
-0.3
N.D.
phage
WM_EV240
+0.1
-0.3
-0.3
-0.0
N.D.
phage
WM_EV240
-0.0
-0.2
+0.0
-0.3
N.D.
phage
EV240
-0.1
-0.0
-0.2
-0.2
N.D.
phage
WM_TP9
-0.0
-0.2
-0.3
+0.1
N.D.
phage
TP9
-0.1
-0.3
+0.0
-0.1
N.D.
carbon source
Sodium-DL-Lactate
-0.1
-0.0
+0.0
-0.2
N.D.
phage
WM_RB68
+0.0
-0.2
-0.1
-0.0
N.D.
phage
Bas14
-0.2
-0.1
+0.1
-0.1
N.D.
phage
WM_TP9
-0.0
-0.1
-0.2
+0.0
N.D.
phage
WM_Bas41
-0.1
-0.0
-0.1
+0.1
N.D.
carbon source
Casamino-acids
-0.1
-0.1
+0.0
-0.0
N.D.
phage
WM_Bas09
-0.1
-0.1
-0.2
+0.2
N.D.
phage
WM_Bas14
+0.1
-0.1
-0.3
+0.1
N.D.
phage
Bas14
-0.1
-0.0
-0.0
-0.1
N.D.
no phage control
Control_ECRC101_WM
-0.0
-0.2
-0.1
+0.2
N.D.
no phage control
Control_ECRC101_WM
+0.0
-0.2
+0.1
+0.1
N.D.
carbon source
L-Arabinose
+0.1
+0.2
-0.1
-0.2
N.D.
carbon source
Sodium-DL-Lactate
+0.2
-0.2
+0.1
-0.1
N.D.
phage
WM_Bas09
+0.2
-0.2
-0.1
+0.1
N.D.
carbon source
Casamino-acids
+0.2
-0.0
-0.2
+0.0
N.D.
carbon source
L-Arabinose
+0.1
+0.1
+0.0
-0.2
N.D.
carbon source
D-Glucose
+0.1
+0.1
+0.0
-0.1
N.D.
carbon source
D-Glucose
+0.1
+0.2
+0.1
-0.1
N.D.
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