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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yqgE and gshB are separated by 39 nucleotides
gshB and rsmE are separated by 12 nucleotides
rsmE and endA are separated by 79 nucleotides
endA and sprT are separated by 94 nucleotides
MCAODC_09790: yqgE - YqgE/AlgH family protein, at 1,949,798 to 1,950,433
yqgE
MCAODC_09795: gshB - glutathione synthase, at 1,950,473 to 1,951,420
gshB
MCAODC_09800: rsmE - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 1,951,433 to 1,952,164
rsmE
MCAODC_09805: endA - deoxyribonuclease I, at 1,952,244 to 1,952,951
endA
MCAODC_09810: sprT - SprT family zinc-dependent metalloprotease, at 1,953,046 to 1,953,501
sprT
Group
Condition
MCAODC
_09790
MCAODC
_09795
MCAODC
_09800
MCAODC
_09805
MCAODC
_09810
yqgE
gshB
rsmE
endA
sprT
phage
Bas09
+0.5
-1.4
-0.4
-0.9
-0.1
phage
EV240
+0.3
-2.2
-0.1
-0.0
-0.2
phage
TP9
-1.0
-0.7
-0.1
-0.3
+0.0
phage
EV240
+0.4
-1.9
+0.0
-0.2
-0.2
phage
WM_EV240
-0.1
-1.1
+0.1
-0.3
-0.3
carbon source
Casamino-acids
+0.1
-1.6
-0.1
-0.1
+0.0
phage
WM_EV240
-0.3
-0.9
-0.0
-0.2
+0.0
phage
WM_TP9
-0.2
-0.5
-0.0
-0.2
-0.3
phage
WM_Bas41
+0.1
-1.0
-0.1
-0.0
-0.1
phage
Bas09
+0.2
-0.7
+0.1
-0.6
-0.1
phage
WM_Bas09
-0.2
-0.3
-0.1
-0.1
-0.2
carbon source
Casamino-acids
-0.3
-0.5
+0.2
-0.0
-0.2
phage
WM_Bas14
+0.2
-0.7
+0.1
-0.1
-0.3
carbon source
D-Glucose
-0.3
-0.5
+0.1
+0.1
+0.0
phage
Bas14
+0.1
-0.6
-0.1
-0.0
-0.0
phage
WM_TP9
-0.1
-0.2
-0.0
-0.1
-0.2
phage
Bas14
-0.3
-0.1
-0.2
-0.1
+0.1
phage
WM_RB68
+0.1
-0.4
+0.0
-0.2
-0.1
carbon source
L-Arabinose
-0.1
-0.5
+0.1
+0.1
+0.0
phage
WM_Bas09
+0.0
-0.4
+0.2
-0.2
-0.1
carbon source
D-Glucose
+0.3
-1.0
+0.1
+0.2
+0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
-0.0
-0.2
-0.1
carbon source
Sodium-DL-Lactate
+0.2
-0.3
-0.1
-0.0
+0.0
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.0
-0.2
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.1
+0.2
-0.2
+0.1
carbon source
L-Arabinose
+0.2
-0.2
+0.1
+0.2
-0.1
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