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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
nupG and mltC are separated by 201 nucleotides
mltC and yggX are separated by 64 nucleotides
yggX and mutY are separated by 27 nucleotides
mutY and trmB are separated by 160 nucleotides
MCAODC_09705: nupG - nucleoside permease NupG, at 1,936,233 to 1,937,489
nupG
MCAODC_09710: mltC - membrane-bound lytic murein transglycosylase MltC, at 1,937,691 to 1,938,770
mltC
MCAODC_09715: yggX - oxidative damage protection protein, at 1,938,835 to 1,939,110
yggX
MCAODC_09720: mutY - A/G-specific adenine glycosylase, at 1,939,138 to 1,940,190
mutY
MCAODC_09725: trmB - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 1,940,351 to 1,941,070
trmB
Group
Condition
MCAODC
_09705
MCAODC
_09710
MCAODC
_09715
MCAODC
_09720
MCAODC
_09725
nupG
mltC
yggX
mutY
trmB
carbon source
L-Arabinose
-0.1
-0.2
-0.1
-0.2
-0.4
phage
WM_Bas41
-0.1
-0.0
-0.7
+0.1
+0.0
phage
WM_TP9
+0.0
-0.2
-0.3
-0.1
-0.1
phage
WM_Bas09
-0.1
-0.1
-0.7
+0.2
-0.0
phage
EV240
+0.1
+0.1
-1.1
-0.1
+0.4
carbon source
D-Glucose
-0.1
-0.0
-0.4
+0.1
-0.2
phage
EV240
+0.3
+0.2
-1.3
-0.1
+0.4
phage
WM_RB68
-0.1
+0.1
-0.3
-0.1
-0.1
carbon source
L-Arabinose
+0.1
-0.1
-0.4
-0.0
-0.0
no phage control
Control_ECRC101_WM
+0.2
-0.1
-0.3
-0.1
-0.0
carbon source
Casamino-acids
-0.1
-0.0
-0.2
+0.1
-0.1
carbon source
D-Glucose
-0.0
-0.2
+0.1
+0.1
-0.3
no phage control
Control_ECRC101_WM
-0.0
+0.1
-0.2
-0.0
-0.1
phage
WM_Bas14
-0.0
+0.0
+0.1
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.0
-0.3
-0.1
+0.3
phage
WM_EV240
+0.2
-0.0
-0.5
-0.1
+0.4
carbon source
Casamino-acids
+0.1
-0.0
-0.0
+0.0
+0.0
phage
WM_Bas09
+0.2
+0.1
-0.4
+0.0
+0.2
phage
WM_EV240
+0.1
+0.1
+0.2
-0.2
-0.0
phage
Bas09
-0.0
+0.0
+0.1
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.1
-0.0
+0.4
phage
TP9
-0.2
-0.1
+0.3
+0.1
+0.1
phage
Bas09
+0.2
-0.0
+0.1
-0.0
+0.1
phage
Bas14
+0.1
+0.0
+0.1
+0.1
+0.1
phage
Bas14
+0.1
+0.0
+0.1
+0.0
+0.1
phage
WM_TP9
-0.1
-0.0
+0.4
-0.0
+0.2
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