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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
hybE and hypA overlap by 8 nucleotides
hypA and hybG are separated by 12 nucleotides
hybG and yghU are separated by 122 nucleotides
yghU and gss are separated by 204 nucleotides
MCAODC_09545: hybE - hydrogenase-2 assembly chaperone, at 1,903,615 to 1,904,103
hybE
MCAODC_09550: hypA - hydrogenase maturation nickel metallochaperone HypA, at 1,904,096 to 1,904,437
hypA
MCAODC_09555: hybG - hydrogenase maturation factor HybG, at 1,904,450 to 1,904,698
hybG
MCAODC_09565: yghU - glutathione-dependent disulfide-bond oxidoreductase, at 1,904,821 to 1,905,687
yghU
MCAODC_09570: gss - bifunctional glutathionylspermidine amidase/synthase, at 1,905,892 to 1,907,751
gss
Group
Condition
MCAODC
_09545
MCAODC
_09550
MCAODC
_09555
MCAODC
_09565
MCAODC
_09570
hybE
hypA
hybG
yghU
gss
carbon source
D-Glucose
-0.8
-0.2
-0.1
+0.0
-0.1
phage
WM_Bas09
-0.2
-0.2
-0.5
+0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.5
-0.6
+0.3
+0.0
-0.1
no phage control
Control_ECRC101_WM
-0.4
-0.6
+0.0
+0.2
-0.0
phage
Bas09
+0.1
-0.4
-0.1
-0.1
-0.1
phage
WM_EV240
-0.4
-0.1
-0.1
+0.0
-0.1
phage
WM_EV240
-0.4
+0.2
+0.1
-0.3
-0.2
phage
EV240
+0.1
-0.4
-0.3
-0.0
-0.0
phage
WM_Bas14
-0.2
-0.3
+0.0
-0.1
-0.1
phage
WM_TP9
-0.3
-0.1
-0.1
+0.1
-0.0
no phage control
Control_ECRC101_WM
-0.3
-0.3
+0.3
+0.0
-0.0
carbon source
Sodium-DL-Lactate
-0.4
+0.0
+0.2
-0.0
-0.1
phage
Bas09
+0.1
-0.2
-0.0
-0.2
-0.0
phage
WM_Bas41
-0.3
-0.2
+0.1
+0.1
+0.1
carbon source
L-Arabinose
+0.2
-0.1
-0.2
+0.1
-0.1
phage
Bas14
-0.0
+0.2
+0.3
-0.3
-0.1
carbon source
L-Arabinose
-0.0
-0.3
+0.3
-0.1
+0.1
phage
WM_RB68
-0.2
-0.1
+0.4
+0.1
-0.1
phage
WM_TP9
-0.2
+0.1
+0.3
-0.1
+0.1
phage
TP9
-0.4
+0.1
+0.6
-0.2
+0.0
carbon source
D-Glucose
+0.2
-0.0
-0.3
+0.2
+0.1
phage
WM_Bas09
+0.1
-0.2
+0.2
+0.2
-0.1
carbon source
Casamino-acids
-0.0
-0.1
+0.2
+0.2
+0.0
carbon source
Casamino-acids
-0.0
-0.0
+0.4
+0.1
-0.0
phage
EV240
+0.1
-0.2
+0.7
+0.0
-0.1
phage
Bas14
-0.1
-0.3
+0.9
+0.0
+0.1
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