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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
cca and ygiM are separated by 63 nucleotides
ygiM and ygiF are separated by 241 nucleotides
ygiF and glnE are separated by 22 nucleotides
glnE and hldE are separated by 47 nucleotides
MCAODC_09230: cca - fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca, at 1,842,109 to 1,843,347
cca
MCAODC_09235: ygiM - TIGR04211 family SH3 domain-containing protein, at 1,843,411 to 1,844,031
ygiM
MCAODC_09240: ygiF - inorganic triphosphatase, at 1,844,273 to 1,845,574
ygiF
MCAODC_09245: glnE - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 1,845,597 to 1,848,437
glnE
MCAODC_09250: hldE - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 1,848,485 to 1,849,918
hldE
Group
Condition
MCAODC
_09230
MCAODC
_09235
MCAODC
_09240
MCAODC
_09245
MCAODC
_09250
cca
ygiM
ygiF
glnE
hldE
carbon source
L-Arabinose
N.D.
+0.0
-0.2
-0.5
N.D.
phage
TP9
N.D.
-0.2
-0.1
-0.0
N.D.
carbon source
Casamino-acids
N.D.
-0.0
-0.3
+0.0
N.D.
phage
WM_TP9
N.D.
+0.1
-0.3
-0.1
N.D.
carbon source
L-Arabinose
N.D.
+0.1
+0.0
-0.4
N.D.
carbon source
Casamino-acids
N.D.
+0.2
-0.3
-0.1
N.D.
carbon source
D-Glucose
N.D.
+0.1
-0.1
-0.1
N.D.
phage
WM_Bas09
N.D.
-0.1
-0.0
-0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
+0.0
-0.2
+0.0
N.D.
phage
WM_TP9
N.D.
-0.2
+0.0
+0.1
N.D.
phage
WM_Bas09
N.D.
-0.0
+0.0
+0.0
N.D.
phage
WM_Bas14
N.D.
-0.0
-0.0
+0.1
N.D.
phage
Bas09
N.D.
+0.0
+0.2
-0.1
N.D.
no phage control
Control_ECRC101_WM
N.D.
-0.1
+0.2
-0.0
N.D.
phage
WM_RB68
N.D.
+0.1
-0.1
+0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
+0.1
-0.0
+0.0
N.D.
carbon source
D-Glucose
N.D.
+0.3
+0.0
-0.2
N.D.
no phage control
Control_ECRC101_WM
N.D.
+0.1
+0.1
-0.0
N.D.
phage
Bas09
N.D.
-0.0
+0.2
-0.0
N.D.
phage
WM_Bas41
N.D.
+0.2
+0.0
-0.0
N.D.
phage
Bas14
N.D.
-0.0
+0.2
+0.1
N.D.
phage
EV240
N.D.
+0.1
+0.4
-0.2
N.D.
phage
EV240
N.D.
+0.1
+0.5
-0.1
N.D.
phage
Bas14
N.D.
+0.0
+0.3
+0.2
N.D.
phage
WM_EV240
N.D.
+0.1
+0.7
-0.1
N.D.
phage
WM_EV240
N.D.
+0.2
+0.6
+0.0
N.D.
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