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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
rpoD and dnaG are separated by 194 nucleotides
dnaG and rpsU are separated by 110 nucleotides
rpsU and tsaD are separated by 237 nucleotides
tsaD and ttdT are separated by 42 nucleotides
MCAODC_09170: rpoD - RNA polymerase sigma factor RpoD, at 1,830,347 to 1,832,188
rpoD
MCAODC_09175: dnaG - DNA primase, at 1,832,383 to 1,834,128
dnaG
MCAODC_09180: rpsU - 30S ribosomal protein S21, at 1,834,239 to 1,834,454
rpsU
MCAODC_09185: tsaD - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,834,692 to 1,835,705
tsaD
MCAODC_09190: ttdT - L-tartrate/succinate antiporter, at 1,835,748 to 1,837,211
ttdT
Group
Condition
MCAODC
_09170
MCAODC
_09175
MCAODC
_09180
MCAODC
_09185
MCAODC
_09190
rpoD
dnaG
rpsU
tsaD
ttdT
phage
WM_Bas41
N.D.
N.D.
N.D.
N.D.
-0.3
phage
WM_Bas09
N.D.
N.D.
N.D.
N.D.
-0.2
phage
WM_TP9
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.2
no phage control
Control_ECRC101_WM
N.D.
N.D.
N.D.
N.D.
-0.1
phage
EV240
N.D.
N.D.
N.D.
N.D.
-0.1
phage
TP9
N.D.
N.D.
N.D.
N.D.
-0.1
phage
WM_RB68
N.D.
N.D.
N.D.
N.D.
-0.1
phage
WM_Bas14
N.D.
N.D.
N.D.
N.D.
-0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
N.D.
N.D.
-0.1
phage
WM_Bas09
N.D.
N.D.
N.D.
N.D.
-0.1
phage
Bas09
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
-0.0
phage
WM_TP9
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.0
phage
WM_EV240
N.D.
N.D.
N.D.
N.D.
-0.0
phage
Bas09
N.D.
N.D.
N.D.
N.D.
+0.0
phage
WM_EV240
N.D.
N.D.
N.D.
N.D.
+0.1
phage
Bas14
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
+0.1
phage
EV240
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
+0.1
phage
Bas14
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
+0.3
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