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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
rlmG and higB are separated by 283 nucleotides
higB and higA overlap by 4 nucleotides
higA and fadH are separated by 44 nucleotides
fadH and ygjK are separated by 525 nucleotides
MCAODC_09075: rlmG - 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG, at 1,809,260 to 1,810,396
rlmG
MCAODC_09080: higB - type II toxin-antitoxin system toxin HigB, at 1,810,680 to 1,810,994
higB
MCAODC_09085: higA - type II toxin-antitoxin system antitoxin HigA, at 1,810,991 to 1,811,407
higA
MCAODC_09090: fadH - NADPH-dependent 2,4-dienoyl-CoA reductase, at 1,811,452 to 1,813,470
fadH
MCAODC_09105: ygjK - alpha-glucosidase, at 1,813,996 to 1,816,347
ygjK
Group
Condition
MCAODC
_09075
MCAODC
_09080
MCAODC
_09085
MCAODC
_09090
MCAODC
_09105
rlmG
higB
higA
fadH
ygjK
carbon source
Casamino-acids
+0.0
-0.2
-4.7
-0.0
+0.0
phage
EV240
+0.0
-0.1
-2.5
+0.1
-0.1
phage
EV240
+0.2
-0.2
-2.4
+0.1
+0.0
carbon source
L-Arabinose
-0.1
-0.2
-1.8
-0.2
+0.0
carbon source
D-Glucose
-0.2
+0.0
-1.8
+0.0
+0.0
carbon source
Casamino-acids
+0.1
+0.0
-2.2
+0.1
+0.2
phage
WM_EV240
+0.1
-0.0
-1.9
+0.1
-0.0
phage
Bas09
+0.1
+0.1
-1.7
+0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.0
-1.2
+0.0
-0.0
phage
WM_TP9
-0.1
-0.1
-0.8
+0.1
-0.1
phage
WM_Bas09
-0.0
-0.1
-0.8
-0.1
-0.1
phage
WM_Bas41
-0.1
-0.3
-0.1
-0.2
-0.0
phage
Bas09
+0.2
-0.0
-0.9
+0.0
+0.1
phage
WM_EV240
+0.0
-0.1
-0.3
-0.1
-0.1
phage
Bas14
-0.0
+0.1
-0.9
+0.0
+0.2
phage
WM_TP9
+0.2
-0.3
-0.5
+0.0
-0.0
no phage control
Control_ECRC101_WM
+0.0
-0.2
-0.3
+0.0
+0.0
carbon source
Sodium-DL-Lactate
+0.0
-0.0
-0.4
-0.0
-0.1
phage
WM_RB68
+0.1
-0.2
-0.1
-0.1
-0.1
phage
Bas14
+0.3
-0.1
-0.3
-0.0
-0.2
carbon source
D-Glucose
-0.0
-0.1
+0.0
+0.3
+0.0
carbon source
L-Arabinose
+0.1
-0.1
+0.3
+0.1
-0.0
phage
WM_Bas14
-0.0
-0.0
+0.3
+0.1
+0.1
phage
TP9
+0.1
-0.2
+0.8
-0.0
-0.1
phage
WM_Bas09
+0.1
-0.1
+0.9
-0.1
+0.1
no phage control
Control_ECRC101_WM
+0.2
+0.1
+0.5
+0.1
-0.1
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