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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_08895 and yhaB are separated by 21 nucleotides
yhaB and tdcR are separated by 255 nucleotides
tdcR and tdcA are separated by 188 nucleotides
tdcA and tdcB are separated by 98 nucleotides
MCAODC_08895: MCAODC_08895 - YhaC family protein, at 1,775,535 to 1,776,722
_08895
MCAODC_08900: yhaB - Uncharacterized protein YhaB, at 1,776,744 to 1,777,283
yhaB
MCAODC_08905: tdcR - transcriptional activator TdcR, at 1,777,539 to 1,777,883
tdcR
MCAODC_08910: tdcA - transcriptional regulator TdcA, at 1,778,072 to 1,779,010
tdcA
MCAODC_08915: tdcB - bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB, at 1,779,109 to 1,780,098
tdcB
Group
Condition
MCAODC
_08895
MCAODC
_08900
MCAODC
_08905
MCAODC
_08910
MCAODC
_08915
yhaB
tdcR
tdcA
tdcB
phage
WM_Bas41
+0.2
-4.0
+0.4
+0.2
-0.4
phage
WM_Bas09
+0.4
-0.6
-0.3
-0.1
-0.7
carbon source
D-Glucose
+0.4
-0.5
-0.7
+0.2
-0.4
carbon source
Casamino-acids
-0.3
-1.0
+0.1
-0.1
+0.1
phage
WM_Bas09
+0.0
-1.0
+0.2
-0.4
+0.2
carbon source
L-Arabinose
-0.1
-1.3
-0.2
+0.1
+0.6
carbon source
Sodium-DL-Lactate
+0.2
-1.4
+0.7
-0.1
-0.2
phage
WM_EV240
+0.6
-0.2
-0.5
-0.3
-0.2
phage
Bas09
-1.0
+0.2
+0.2
-0.3
+0.3
phage
WM_EV240
+0.0
-0.1
+0.2
-0.1
+0.3
phage
EV240
+0.5
-0.4
+0.2
-0.2
+0.4
phage
WM_TP9
+0.6
+0.5
-0.1
-0.2
-0.5
phage
WM_TP9
+0.4
+0.3
+0.1
+0.1
-0.3
phage
Bas14
+1.5
-0.3
-0.0
+0.1
-0.5
phage
TP9
-0.1
+1.5
-0.2
-0.1
-0.1
no phage control
Control_ECRC101_WM
+0.1
+1.0
+0.3
-0.2
-0.2
carbon source
Sodium-DL-Lactate
-0.2
+0.8
+0.3
-0.1
+0.3
phage
WM_RB68
+0.7
+0.9
+0.3
-0.2
-0.3
phage
Bas14
+0.4
+2.2
-0.8
+0.1
-0.4
phage
WM_Bas14
+0.6
+0.3
+0.5
-0.1
+0.2
carbon source
D-Glucose
-0.2
+0.7
+0.5
+0.0
+0.7
carbon source
L-Arabinose
+0.4
+0.5
+0.3
+0.0
+0.5
carbon source
Casamino-acids
-0.1
+0.7
+0.7
-0.1
+0.4
no phage control
Control_ECRC101_WM
+0.6
+0.9
+0.5
-0.1
-0.2
phage
EV240
+0.6
+1.9
-0.5
-0.1
-0.0
phage
Bas09
+0.9
+1.2
-0.1
-0.0
+0.2
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