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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
agaR and yhaV are separated by 54 nucleotides
yhaV and prlF overlap by 1 nucleotides
prlF and garD are separated by 148 nucleotides
garD and garP are separated by 374 nucleotides
MCAODC_08850: agaR - aga operon transcriptional regulator AgaR, at 1,766,979 to 1,767,788
agaR
MCAODC_08855: yhaV - type II toxin-antitoxin system ribonuclease toxin YhaV, at 1,767,843 to 1,768,307
yhaV
MCAODC_08860: prlF - type II toxin-antitoxin system antitoxin PrlF, at 1,768,307 to 1,768,642
prlF
MCAODC_08865: garD - galactarate dehydratase, at 1,768,791 to 1,770,362
garD
MCAODC_08870: garP - galactarate/glucarate/glycerate transporter GarP, at 1,770,737 to 1,772,071
garP
Group
Condition
MCAODC
_08850
MCAODC
_08855
MCAODC
_08860
MCAODC
_08865
MCAODC
_08870
agaR
yhaV
prlF
garD
garP
phage
Bas09
-1.1
+0.2
-0.8
+0.0
-0.1
phage
TP9
-0.5
+0.1
-0.6
-0.2
-0.2
phage
EV240
-0.5
-0.0
-0.7
+0.1
-0.1
phage
Bas09
-1.1
+0.2
-0.0
+0.0
-0.1
phage
WM_EV240
-0.1
-0.3
-0.7
+0.0
+0.1
phage
EV240
-0.4
+0.2
-0.9
+0.2
-0.1
phage
WM_Bas41
-0.2
-0.3
-0.3
-0.1
-0.1
phage
WM_EV240
-0.2
+0.2
-0.9
-0.0
+0.1
carbon source
D-Glucose
+0.3
-0.2
-0.3
-0.2
-0.1
phage
Bas14
-0.4
+0.3
-0.4
-0.0
-0.0
carbon source
D-Glucose
-0.4
-0.2
-0.1
+0.1
-0.1
carbon source
Casamino-acids
-0.1
-0.2
-0.1
-0.2
-0.0
carbon source
L-Arabinose
-0.4
-0.2
+0.2
-0.0
+0.0
phage
WM_Bas09
+0.1
-0.2
-0.4
+0.1
+0.0
no phage control
Control_ECRC101_WM
-0.3
-0.1
+0.0
-0.0
+0.1
phage
Bas14
-0.4
+0.3
-0.2
+0.1
-0.1
phage
WM_TP9
-0.0
+0.1
-0.4
+0.1
+0.0
carbon source
Sodium-DL-Lactate
+0.1
-0.1
-0.1
-0.1
+0.1
no phage control
Control_ECRC101_WM
+0.3
-0.2
-0.1
-0.1
-0.1
phage
WM_TP9
-0.1
-0.1
-0.0
+0.0
+0.0
phage
WM_Bas09
+0.2
-0.2
-0.3
-0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.3
+0.1
-0.3
-0.1
-0.1
phage
WM_RB68
+0.3
-0.2
-0.2
+0.0
-0.0
carbon source
Casamino-acids
+0.1
+0.1
-0.0
-0.1
+0.0
carbon source
L-Arabinose
+0.2
-0.0
+0.1
+0.1
-0.1
phage
WM_Bas14
+0.4
+0.0
-0.0
+0.1
+0.1
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