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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
agaE and agaW overlap by 11 nucleotides
agaW and agaV are separated by 10 nucleotides
agaV and kbaZ are separated by 22 nucleotides
kbaZ and agaR are separated by 248 nucleotides
MCAODC_08830: agaE - PTS N-acetylgalactosamine transporter subunit IID, at 1,763,296 to 1,764,174
agaE
MCAODC_08835: agaW - PTS N-acetylgalactosamine transporter subunit IIC, at 1,764,164 to 1,764,943
agaW
MCAODC_08840: agaV - PTS N-acetylgalactosamine transporter subunit IIB, at 1,764,954 to 1,765,427
agaV
MCAODC_08845: kbaZ - tagatose-bisphosphate aldolase subunit KbaZ, at 1,765,450 to 1,766,730
kbaZ
MCAODC_08850: agaR - aga operon transcriptional regulator AgaR, at 1,766,979 to 1,767,788
agaR
Group
Condition
MCAODC
_08830
MCAODC
_08835
MCAODC
_08840
MCAODC
_08845
MCAODC
_08850
agaE
agaW
agaV
kbaZ
agaR
phage
Bas09
+0.1
-0.1
-0.2
-0.1
-1.1
carbon source
D-Glucose
-0.3
-0.3
+0.0
+0.1
-0.4
phage
EV240
-0.3
+0.1
+0.1
-0.3
-0.4
phage
Bas14
+0.1
-0.1
-0.3
+0.0
-0.4
phage
Bas09
+0.0
-0.0
+0.6
-0.1
-1.1
phage
EV240
+0.1
+0.3
+0.1
-0.4
-0.5
phage
WM_EV240
-0.1
-0.1
-0.3
+0.1
-0.2
carbon source
L-Arabinose
-0.0
-0.1
-0.2
-0.3
+0.2
phage
Bas14
-0.0
-0.0
+0.3
-0.1
-0.4
carbon source
Sodium-DL-Lactate
-0.2
+0.0
+0.2
-0.2
+0.1
carbon source
L-Arabinose
-0.0
+0.1
+0.3
-0.0
-0.4
no phage control
Control_ECRC101_WM
-0.0
-0.1
+0.2
+0.1
-0.3
carbon source
Casamino-acids
-0.0
+0.0
-0.2
+0.1
+0.1
phage
WM_TP9
-0.0
-0.0
+0.0
+0.1
-0.0
phage
TP9
+0.0
+0.2
+0.2
+0.2
-0.5
phage
WM_RB68
-0.1
+0.1
-0.4
+0.1
+0.3
carbon source
D-Glucose
+0.1
+0.0
-0.3
+0.1
+0.3
phage
WM_TP9
+0.1
+0.2
+0.2
-0.2
-0.1
phage
WM_Bas41
+0.1
+0.2
-0.0
+0.2
-0.2
phage
WM_EV240
-0.2
+0.1
+0.5
+0.1
-0.1
phage
WM_Bas09
-0.1
+0.1
-0.0
+0.3
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.2
+0.2
-0.0
+0.3
phage
WM_Bas09
+0.0
-0.1
+0.2
+0.1
+0.2
phage
WM_Bas14
-0.0
+0.0
+0.1
+0.1
+0.4
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.2
+0.2
+0.3
carbon source
Casamino-acids
+0.3
+0.0
+0.3
+0.3
-0.1
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