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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
nagA and agaF overlap by 4 nucleotides
agaF and agaE are separated by 17 nucleotides
agaE and agaW overlap by 11 nucleotides
agaW and agaV are separated by 10 nucleotides
MCAODC_08820: nagA - N-acetylglucosamine-6-phosphate deacetylase, at 1,761,714 to 1,762,847
nagA
MCAODC_08825: agaF - PTS galactosamine/N-acetylgalactosamine transporter subunit IIA, at 1,762,844 to 1,763,278
agaF
MCAODC_08830: agaE - PTS N-acetylgalactosamine transporter subunit IID, at 1,763,296 to 1,764,174
agaE
MCAODC_08835: agaW - PTS N-acetylgalactosamine transporter subunit IIC, at 1,764,164 to 1,764,943
agaW
MCAODC_08840: agaV - PTS N-acetylgalactosamine transporter subunit IIB, at 1,764,954 to 1,765,427
agaV
Group
Condition
MCAODC
_08820
MCAODC
_08825
MCAODC
_08830
MCAODC
_08835
MCAODC
_08840
nagA
agaF
agaE
agaW
agaV
phage
WM_RB68
-0.1
-0.3
-0.1
+0.1
-0.4
phage
WM_EV240
-0.3
-0.0
-0.1
-0.1
-0.3
carbon source
D-Glucose
-0.2
+0.2
-0.3
-0.3
+0.0
carbon source
L-Arabinose
+0.1
-0.2
-0.0
-0.1
-0.2
phage
EV240
+0.1
-0.4
-0.3
+0.1
+0.1
phage
Bas09
-0.1
-0.1
+0.1
-0.1
-0.2
carbon source
D-Glucose
+0.1
-0.2
+0.1
+0.0
-0.3
carbon source
Casamino-acids
-0.0
-0.0
-0.0
+0.0
-0.2
phage
Bas14
-0.1
+0.2
+0.1
-0.1
-0.3
phage
WM_Bas09
-0.1
-0.1
-0.1
+0.1
-0.0
phage
WM_TP9
-0.1
+0.0
-0.0
-0.0
+0.0
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.0
-0.1
+0.2
phage
EV240
-0.1
-0.4
+0.1
+0.3
+0.1
phage
WM_Bas09
-0.1
+0.1
+0.0
-0.1
+0.2
phage
Bas14
-0.2
+0.1
-0.0
-0.0
+0.3
no phage control
Control_ECRC101_WM
-0.1
-0.0
+0.1
-0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.0
+0.0
-0.2
+0.0
+0.2
phage
WM_Bas14
-0.1
+0.2
-0.0
+0.0
+0.1
carbon source
Sodium-DL-Lactate
-0.2
+0.2
+0.1
-0.2
+0.2
phage
WM_TP9
-0.1
-0.2
+0.1
+0.2
+0.2
phage
WM_Bas41
+0.0
-0.0
+0.1
+0.2
-0.0
phage
TP9
-0.3
+0.2
+0.0
+0.2
+0.2
phage
WM_EV240
-0.2
+0.3
-0.2
+0.1
+0.5
phage
Bas09
+0.2
-0.0
+0.0
-0.0
+0.6
carbon source
Casamino-acids
-0.2
+0.5
+0.3
+0.0
+0.3
carbon source
L-Arabinose
-0.0
+0.6
-0.0
+0.1
+0.3
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