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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
agaD and agaC overlap by 11 nucleotides
agaC and agaB are separated by 212 nucleotides
agaB and kbaY are separated by 166 nucleotides
kbaY and agaS are separated by 12 nucleotides
MCAODC_08795: agaD - PTS galactosamine transporter subunit IID, at 1,757,070 to 1,757,861
agaD
MCAODC_08800: agaC - PTS galactosamine transporter subunit IIC, at 1,757,851 to 1,758,480
agaC
MCAODC_08805: agaB - PTS galactosamine transporter subunit IIB, at 1,758,693 to 1,759,169
agaB
MCAODC_08810: kbaY - tagatose-bisphosphate aldolase subunit KbaY, at 1,759,336 to 1,760,196
kbaY
MCAODC_08815: agaS - D-galactosamine-6-phosphate deaminase AgaS, at 1,760,209 to 1,761,363
agaS
Group
Condition
MCAODC
_08795
MCAODC
_08800
MCAODC
_08805
MCAODC
_08810
MCAODC
_08815
agaD
agaC
agaB
kbaY
agaS
phage
WM_EV240
+0.1
+0.3
-1.0
-0.3
+0.3
phage
WM_EV240
-0.2
-0.0
-0.4
-0.2
+0.2
phage
TP9
-0.0
-0.1
-0.1
-0.4
-0.0
no phage control
Control_ECRC101_WM
-0.0
+0.1
-0.7
+0.0
-0.0
carbon source
L-Arabinose
+0.1
-0.1
-0.4
-0.2
+0.2
phage
Bas14
+0.1
-0.1
-0.2
+0.0
-0.1
no phage control
Control_ECRC101_WM
-0.0
-0.0
-0.2
+0.0
-0.0
phage
WM_Bas41
-0.1
+0.1
-0.2
+0.1
-0.0
phage
Bas09
-0.0
-0.1
+0.3
-0.3
-0.1
phage
Bas09
+0.1
-0.2
-0.4
+0.1
+0.1
phage
WM_Bas09
-0.1
-0.2
+0.2
-0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.0
+0.0
-0.2
+0.2
-0.1
phage
WM_Bas14
-0.1
+0.1
+0.3
-0.0
-0.3
phage
EV240
+0.2
+0.2
-0.1
+0.0
-0.4
phage
WM_RB68
-0.2
+0.1
+0.0
+0.1
+0.1
carbon source
D-Glucose
+0.2
+0.0
+0.1
-0.1
-0.2
phage
EV240
+0.0
+0.0
+0.0
+0.1
-0.0
carbon source
Casamino-acids
+0.1
+0.1
-0.3
+0.3
-0.0
carbon source
Casamino-acids
+0.0
+0.4
-0.4
+0.3
-0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.2
-0.2
+0.1
+0.0
phage
WM_Bas09
-0.1
+0.3
+0.2
-0.0
-0.1
phage
WM_TP9
+0.0
+0.3
+0.3
-0.2
-0.1
carbon source
D-Glucose
+0.2
+0.2
-0.1
-0.0
+0.0
phage
WM_TP9
-0.1
+0.2
+0.2
+0.1
+0.0
phage
Bas14
+0.1
-0.1
+0.3
+0.1
-0.1
carbon source
L-Arabinose
+0.2
+0.2
+0.1
+0.2
-0.0
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