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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
nanE and nanK overlap by 4 nucleotides
nanK and nanQ overlap by 4 nucleotides
nanQ and yhcG are separated by 59 nucleotides
yhcG and gltD are separated by 183 nucleotides
MCAODC_08380: nanE - Putative N-acetylmannosamine-6-phosphate 2-epimerase, at 1,679,912 to 1,680,601
nanE
MCAODC_08385: nanK - N-acetylmannosamine kinase, at 1,680,598 to 1,681,473
nanK
MCAODC_08390: nanQ - N-acetylneuraminate anomerase, at 1,681,470 to 1,681,934
nanQ
MCAODC_08395: yhcG - Putative nuclease YhcG, at 1,681,994 to 1,683,043
yhcG
MCAODC_08400: gltD - glutamate synthase subunit GltD, at 1,683,227 to 1,684,645
gltD
Group
Condition
MCAODC
_08380
MCAODC
_08385
MCAODC
_08390
MCAODC
_08395
MCAODC
_08400
nanE
nanK
nanQ
yhcG
gltD
phage
WM_TP9
-0.1
-0.2
-0.2
+0.1
-1.3
no phage control
Control_ECRC101_WM
-0.1
-0.2
-0.3
+0.1
-1.1
phage
WM_TP9
+0.1
-0.2
-0.2
+0.0
-1.3
carbon source
L-Arabinose
-0.1
-0.1
-0.3
-0.1
-1.0
carbon source
Sodium-DL-Lactate
-0.5
-0.0
-0.2
-0.1
-0.7
phage
WM_Bas09
-0.1
+0.1
-0.1
-0.1
-1.2
phage
WM_Bas09
+0.0
+0.0
-0.4
+0.0
-1.1
no phage control
Control_ECRC101_WM
-0.1
+0.1
+0.0
-0.0
-1.1
phage
WM_EV240
+0.2
-0.1
-0.3
-0.2
-0.6
phage
WM_Bas14
-0.1
-0.3
-0.1
+0.1
-0.6
carbon source
D-Glucose
+0.2
-0.0
-0.3
-0.1
-0.6
phage
WM_EV240
+0.2
+0.0
+0.0
-0.1
-1.0
carbon source
Sodium-DL-Lactate
+0.1
-0.1
+0.3
-0.0
-0.9
phage
WM_RB68
-0.0
-0.3
-0.2
-0.0
-0.1
phage
EV240
+0.0
-0.2
-0.3
-0.0
-0.1
phage
EV240
-0.0
-0.4
-0.0
-0.1
+0.0
phage
Bas14
-0.1
-0.6
-0.1
+0.1
+0.1
phage
WM_Bas41
+0.1
+0.0
+0.0
+0.2
-0.8
phage
TP9
-0.1
-0.1
-0.3
+0.0
+0.1
carbon source
L-Arabinose
+0.0
+0.0
+0.3
-0.0
-0.7
phage
Bas14
+0.2
-0.6
+0.1
+0.1
+0.1
phage
Bas09
-0.2
-0.2
+0.2
+0.1
-0.0
phage
Bas09
-0.0
-0.2
+0.2
+0.0
-0.1
carbon source
Casamino-acids
-0.1
-0.2
+0.3
-0.0
+0.1
carbon source
Casamino-acids
-0.0
+0.4
-0.3
+0.0
+0.1
carbon source
D-Glucose
+0.1
-0.1
+0.3
+0.4
-0.4
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