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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
tldD and aaeR are separated by 133 nucleotides
aaeR and aaeX are separated by 182 nucleotides
aaeX and aaeA are separated by 7 nucleotides
aaeA and aaeB are separated by 5 nucleotides
MCAODC_08275: tldD - metalloprotease TldD, at 1,658,933 to 1,660,378
tldD
MCAODC_08280: aaeR - HTH-type transcriptional activator AaeR, at 1,660,512 to 1,661,441
aaeR
MCAODC_08285: aaeX - p-hydroxybenzoic acid efflux pump operon protein AaeX, at 1,661,624 to 1,661,827
aaeX
MCAODC_08290: aaeA - p-hydroxybenzoic acid efflux pump subunit AaeA, at 1,661,835 to 1,662,764
aaeA
MCAODC_08295: aaeB - p-hydroxybenzoic acid efflux pump subunit AaeB, at 1,662,770 to 1,664,737
aaeB
Group
Condition
MCAODC
_08275
MCAODC
_08280
MCAODC
_08285
MCAODC
_08290
MCAODC
_08295
tldD
aaeR
aaeX
aaeA
aaeB
phage
EV240
-0.1
-0.2
-0.4
-0.1
-0.0
phage
Bas09
-0.0
-0.1
-0.1
-0.0
-0.3
phage
WM_Bas41
-0.2
+0.1
-0.2
-0.1
+0.1
phage
WM_RB68
+0.0
-0.0
-0.4
+0.0
+0.0
phage
Bas09
-0.1
+0.0
-0.1
-0.1
-0.1
phage
WM_TP9
-0.0
-0.0
-0.1
-0.1
-0.1
phage
Bas14
+0.0
-0.1
-0.2
-0.1
+0.0
phage
EV240
-0.0
+0.4
-0.5
+0.1
-0.2
phage
TP9
+0.1
-0.1
-0.2
+0.1
-0.0
carbon source
Casamino-acids
-0.1
+0.2
-0.2
+0.1
-0.1
phage
WM_EV240
+0.2
-0.2
-0.2
+0.1
+0.1
carbon source
D-Glucose
-0.1
-0.0
+0.1
-0.1
+0.0
phage
WM_Bas09
+0.0
+0.0
+0.0
+0.1
-0.1
phage
WM_Bas09
+0.1
+0.2
-0.1
-0.0
-0.0
no phage control
Control_ECRC101_WM
-0.1
+0.0
+0.0
+0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.2
-0.2
-0.0
+0.1
+0.1
carbon source
L-Arabinose
-0.1
+0.3
-0.2
-0.0
+0.2
carbon source
L-Arabinose
-0.1
+0.1
+0.1
+0.1
+0.0
no phage control
Control_ECRC101_WM
+0.1
+0.0
+0.2
+0.1
-0.0
phage
Bas14
+0.1
+0.1
+0.3
-0.1
+0.0
phage
WM_Bas14
+0.2
+0.1
-0.0
+0.1
+0.0
carbon source
Casamino-acids
+0.2
+0.2
-0.0
+0.1
+0.1
phage
WM_TP9
+0.2
+0.1
+0.0
+0.2
+0.0
phage
WM_EV240
+0.3
+0.3
+0.2
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.3
+0.2
+0.1
+0.1
+0.1
carbon source
D-Glucose
+0.2
+0.3
+0.3
+0.2
+0.1
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