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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
mreC and mreD overlap by 1 nucleotides
mreD and yhdE are separated by 8 nucleotides
yhdE and rng overlap by 11 nucleotides
rng and yhdP are separated by 67 nucleotides
MCAODC_08250: mreC - rod shape-determining protein MreC, at 1,651,257 to 1,652,360
mreC
MCAODC_08255: mreD - rod shape-determining protein MreD, at 1,652,360 to 1,652,848
mreD
MCAODC_08260: yhdE - nucleoside triphosphate pyrophosphatase YhdE, at 1,652,857 to 1,653,450
yhdE
MCAODC_08265: rng - ribonuclease G, at 1,653,440 to 1,654,909
rng
MCAODC_08270: yhdP - AsmA2 domain-containing protein YhdP, at 1,654,977 to 1,658,777
yhdP
Group
Condition
MCAODC
_08250
MCAODC
_08255
MCAODC
_08260
MCAODC
_08265
MCAODC
_08270
mreC
mreD
yhdE
rng
yhdP
phage
Bas09
N.D.
N.D.
-0.4
-0.3
-0.3
carbon source
Casamino-acids
N.D.
N.D.
-0.3
-0.0
-0.3
carbon source
L-Arabinose
N.D.
N.D.
-0.4
-0.1
-0.1
phage
WM_Bas41
N.D.
N.D.
-0.1
-0.4
-0.1
phage
TP9
N.D.
N.D.
+0.1
-0.5
-0.1
carbon source
Casamino-acids
N.D.
N.D.
+0.1
-0.2
-0.2
phage
WM_Bas09
N.D.
N.D.
-0.1
-0.4
+0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.2
-0.1
-0.0
phage
WM_TP9
N.D.
N.D.
+0.0
-0.4
-0.0
carbon source
L-Arabinose
N.D.
N.D.
+0.3
-0.6
-0.0
phage
WM_TP9
N.D.
N.D.
+0.1
-0.5
+0.1
phage
Bas14
N.D.
N.D.
+0.0
-0.4
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.0
-0.1
-0.2
phage
WM_RB68
N.D.
N.D.
-0.1
-0.1
-0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.1
-0.1
-0.2
phage
WM_Bas09
N.D.
N.D.
-0.2
+0.2
-0.1
phage
WM_Bas14
N.D.
N.D.
+0.1
-0.2
+0.0
phage
WM_EV240
N.D.
N.D.
+0.1
-0.0
-0.2
phage
Bas09
N.D.
N.D.
+0.2
-0.2
-0.0
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.2
-0.3
+0.1
phage
EV240
N.D.
N.D.
+0.2
+0.3
-0.5
carbon source
D-Glucose
N.D.
N.D.
+0.1
+0.2
-0.1
carbon source
D-Glucose
N.D.
N.D.
-0.1
+0.4
-0.1
phage
Bas14
N.D.
N.D.
+0.5
-0.3
+0.1
phage
WM_EV240
N.D.
N.D.
+0.2
+0.3
-0.2
phage
EV240
N.D.
N.D.
+0.4
+0.6
-0.5
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