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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
acuI and csrD are separated by 151 nucleotides
csrD and mreB are separated by 304 nucleotides
mreB and mreC are separated by 65 nucleotides
mreC and mreD overlap by 1 nucleotides
MCAODC_08235: acuI - putative acrylyl-CoA reductase AcuI, at 1,646,777 to 1,647,751
acuI
MCAODC_08240: csrD - RNase E specificity factor CsrD, at 1,647,903 to 1,649,843
csrD
MCAODC_08245: mreB - rod shape-determining protein MreB, at 1,650,148 to 1,651,191
mreB
MCAODC_08250: mreC - rod shape-determining protein MreC, at 1,651,257 to 1,652,360
mreC
MCAODC_08255: mreD - rod shape-determining protein MreD, at 1,652,360 to 1,652,848
mreD
Group
Condition
MCAODC
_08235
MCAODC
_08240
MCAODC
_08245
MCAODC
_08250
MCAODC
_08255
acuI
csrD
mreB
mreC
mreD
no phage control
Control_ECRC101_WM
-0.5
-0.1
N.D.
N.D.
N.D.
no phage control
Control_ECRC101_WM
-0.2
-0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.1
-0.3
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.1
-0.2
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.2
-0.2
N.D.
N.D.
N.D.
phage
WM_TP9
-0.1
-0.2
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.4
N.D.
N.D.
N.D.
carbon source
Casamino-acids
+0.1
-0.4
N.D.
N.D.
N.D.
carbon source
L-Arabinose
-0.1
-0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.1
-0.2
N.D.
N.D.
N.D.
phage
Bas14
-0.2
+0.0
N.D.
N.D.
N.D.
phage
WM_Bas09
-0.1
+0.0
N.D.
N.D.
N.D.
phage
WM_RB68
+0.0
-0.1
N.D.
N.D.
N.D.
phage
WM_Bas09
+0.0
-0.0
N.D.
N.D.
N.D.
phage
WM_Bas14
+0.1
-0.1
N.D.
N.D.
N.D.
phage
WM_TP9
+0.1
-0.0
N.D.
N.D.
N.D.
phage
WM_EV240
-0.2
+0.2
N.D.
N.D.
N.D.
phage
TP9
+0.0
+0.1
N.D.
N.D.
N.D.
phage
WM_EV240
-0.1
+0.3
N.D.
N.D.
N.D.
phage
WM_Bas41
+0.1
+0.1
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.3
-0.1
N.D.
N.D.
N.D.
phage
Bas14
+0.3
+0.1
N.D.
N.D.
N.D.
phage
Bas09
+0.3
+0.2
N.D.
N.D.
N.D.
phage
Bas09
+0.2
+0.5
N.D.
N.D.
N.D.
phage
EV240
+0.2
+0.6
N.D.
N.D.
N.D.
phage
EV240
+0.2
+0.7
N.D.
N.D.
N.D.
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