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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yhdJ and fis are separated by 84 nucleotides
fis and dusB are separated by 25 nucleotides
dusB and prmA are separated by 328 nucleotides
prmA and panF are separated by 11 nucleotides
MCAODC_08195: yhdJ - adenine-specific DNA-methyltransferase, at 1,638,699 to 1,639,583
yhdJ
MCAODC_08200: fis - DNA-binding transcriptional regulator Fis, at 1,639,668 to 1,639,964
fis
MCAODC_08205: dusB - tRNA dihydrouridine synthase DusB, at 1,639,990 to 1,640,955
dusB
MCAODC_08210: prmA - 50S ribosomal protein L11 methyltransferase, at 1,641,284 to 1,642,165
prmA
MCAODC_08215: panF - sodium/pantothenate symporter, at 1,642,177 to 1,643,628
panF
Group
Condition
MCAODC
_08195
MCAODC
_08200
MCAODC
_08205
MCAODC
_08210
MCAODC
_08215
yhdJ
fis
dusB
prmA
panF
phage
WM_EV240
+0.1
-4.2
-3.4
-0.1
-0.2
phage
EV240
-0.0
-2.4
-4.0
-0.3
-0.6
phage
EV240
+0.0
-2.4
-3.6
-0.2
-0.4
phage
WM_EV240
+0.2
-3.6
-2.5
+0.0
-0.1
phage
WM_Bas09
+0.0
-5.0
-0.6
+0.1
-0.0
phage
Bas14
+0.1
-2.3
-2.5
-0.2
-0.4
phage
Bas14
+0.3
-2.3
-2.8
+0.1
-0.5
phage
Bas09
+0.0
-2.5
-1.7
-0.0
+0.1
phage
Bas09
+0.1
-1.5
-2.0
+0.2
-0.3
phage
WM_Bas09
+0.0
-2.5
-0.2
+0.2
-0.0
phage
WM_TP9
+0.1
-2.6
+0.1
+0.3
-0.0
phage
TP9
+0.0
-0.8
-0.5
+0.0
+0.0
no phage control
Control_ECRC101_WM
+0.1
-1.5
-0.1
+0.2
+0.0
carbon source
Sodium-DL-Lactate
+0.1
-1.4
+0.2
+0.0
-0.1
phage
WM_RB68
+0.3
-1.5
+0.1
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.1
-1.2
+0.1
+0.1
-0.2
carbon source
Casamino-acids
+0.0
-0.8
+0.2
-0.2
-0.0
phage
WM_TP9
-0.1
-0.4
+0.1
-0.2
-0.1
phage
WM_Bas14
+0.2
-0.7
-0.0
+0.1
+0.1
carbon source
L-Arabinose
-0.1
-0.3
+0.1
-0.0
-0.1
carbon source
L-Arabinose
-0.2
+0.1
+0.2
-0.1
-0.1
carbon source
D-Glucose
-0.2
-0.5
+0.4
+0.2
-0.0
carbon source
Casamino-acids
-0.1
-0.1
+0.4
-0.1
-0.0
phage
WM_Bas41
+0.1
+0.1
+0.2
-0.1
+0.0
no phage control
Control_ECRC101_WM
+0.2
+0.0
+0.1
-0.1
+0.2
carbon source
D-Glucose
+0.1
+0.3
+0.2
+0.2
-0.0
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