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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
Thr_trna and 5S_rrna are separated by 39 nucleotides
5S_rrna and yhdZ are separated by 230 nucleotides
yhdZ and yhdY are separated by 7 nucleotides
yhdY and yhdX are separated by 9 nucleotides
MCAODC_08130: Thr_trna - tRNA-Thr(ggt), at 1,627,535 to 1,627,610
_trna
MCAODC_08135: 5S_rrna - 5S ribosomal RNA, at 1,627,650 to 1,627,765
_rrna
MCAODC_08140: yhdZ - Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ, at 1,627,996 to 1,628,754
yhdZ
MCAODC_08145: yhdY - Inner membrane amino-acid ABC transporter permease protein YhdY, at 1,628,762 to 1,629,865
yhdY
MCAODC_08150: yhdX - Putative amino-acid ABC transporter permease protein YhdX, at 1,629,875 to 1,631,056
yhdX
Group
Condition
MCAODC
_08130
MCAODC
_08135
MCAODC
_08140
MCAODC
_08145
MCAODC
_08150
Thr_trna
5S_rrna
yhdZ
yhdY
yhdX
phage
WM_Bas41
N.D.
N.D.
-0.4
-0.3
+0.2
carbon source
D-Glucose
N.D.
N.D.
-0.3
-0.2
+0.0
phage
Bas14
N.D.
N.D.
-0.2
+0.1
-0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.3
-0.1
+0.0
phage
Bas09
N.D.
N.D.
-0.2
+0.2
-0.3
phage
WM_TP9
N.D.
N.D.
-0.1
+0.0
-0.2
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.0
+0.0
-0.2
carbon source
Casamino-acids
N.D.
N.D.
-0.3
+0.0
+0.1
carbon source
L-Arabinose
N.D.
N.D.
-0.0
-0.0
+0.1
phage
Bas09
N.D.
N.D.
+0.0
+0.2
-0.1
phage
Bas14
N.D.
N.D.
-0.1
+0.1
+0.1
phage
TP9
N.D.
N.D.
+0.1
+0.0
+0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.0
+0.1
+0.0
carbon source
L-Arabinose
N.D.
N.D.
-0.0
+0.2
+0.0
phage
WM_TP9
N.D.
N.D.
+0.1
+0.1
-0.0
phage
WM_Bas14
N.D.
N.D.
+0.0
+0.1
+0.1
no phage control
Control_ECRC101_WM
N.D.
N.D.
+0.1
+0.1
+0.0
phage
WM_Bas09
N.D.
N.D.
+0.2
+0.3
-0.1
phage
WM_RB68
N.D.
N.D.
+0.2
+0.0
+0.1
carbon source
Casamino-acids
N.D.
N.D.
+0.3
-0.0
+0.0
phage
WM_EV240
N.D.
N.D.
+0.1
+0.2
+0.0
phage
WM_EV240
N.D.
N.D.
+0.4
-0.1
+0.1
phage
EV240
N.D.
N.D.
+0.2
+0.3
-0.1
phage
WM_Bas09
N.D.
N.D.
+0.1
+0.1
+0.2
phage
EV240
N.D.
N.D.
+0.3
+0.3
-0.1
carbon source
D-Glucose
N.D.
N.D.
+0.3
+0.3
-0.0
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