Fitness for 5 genes in Escherichia coli ECRC101

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500 ntsmg and yrdD are separated by 28 nucleotidesyrdD and tsaC are separated by 4 nucleotidestsaC and aroE are separated by 4 nucleotidesaroE and yrdB overlap by 4 nucleotides MCAODC_08070: smg - DUF494 domain-containing protein, at 1,618,719 to 1,619,192 smg MCAODC_08075: yrdD - Uncharacterized protein YrdD, at 1,619,221 to 1,619,763 yrdD MCAODC_08080: tsaC - L-threonylcarbamoyladenylate synthase type 1 TsaC, at 1,619,768 to 1,620,340 tsaC MCAODC_08085: aroE - shikimate dehydrogenase, at 1,620,345 to 1,621,163 aroE MCAODC_08090: yrdB - Uncharacterized protein YrdB, at 1,621,160 to 1,621,417 yrdB
Group Condition MCAODC_08070 MCAODC_08075 MCAODC_08080 MCAODC_08085 MCAODC_08090
smg yrdD tsaC aroE yrdB
carbon source Sodium-DL-Lactate -0.4 -0.1 N.D. -5.7 -0.1
carbon source Sodium-DL-Lactate +0.1 -0.1 N.D. -5.2 -0.4
carbon source L-Arabinose +0.1 +0.0 N.D. -5.5 -0.2
carbon source L-Arabinose +0.3 +0.0 N.D. -4.7 -0.4
carbon source D-Glucose -0.1 +0.1 N.D. -4.8 +0.2
carbon source D-Glucose +0.1 +0.1 N.D. -4.6 +0.3
no phage control Control_ECRC101_WM -0.1 -0.1 N.D. -3.8 +0.0
phage WM_Bas09 +0.2 -0.0 N.D. -3.6 +0.0
phage WM_Bas41 -0.8 -0.2 N.D. -2.0 -0.0
carbon source Casamino-acids -0.2 +0.0 N.D. -2.3 -0.3
carbon source Casamino-acids +0.1 -0.3 N.D. -3.0 +0.6
phage WM_Bas09 -0.0 +0.1 N.D. -3.0 +0.8
phage WM_Bas14 -0.1 +0.0 N.D. -2.1 -0.1
no phage control Control_ECRC101_WM -0.1 +0.0 N.D. -2.0 -0.1
phage Bas14 +0.3 -0.0 N.D. -1.2 -0.7
phage WM_TP9 -0.2 -0.6 N.D. -0.9 +0.2
phage WM_TP9 -0.2 -0.5 N.D. -1.1 +0.2
phage WM_EV240 -0.6 -0.2 N.D. -0.4 -0.0
phage Bas14 -0.0 -0.2 N.D. -1.2 +0.4
phage Bas09 -0.4 +0.0 N.D. -0.5 +0.1
phage WM_RB68 -0.2 -0.1 N.D. +0.1 -0.2
phage Bas09 -0.1 -0.2 N.D. -0.0 -0.1
phage TP9 +0.3 -0.3 N.D. -0.3 +0.7
phage WM_EV240 -0.0 -0.0 N.D. +0.2 +0.2
phage EV240 -0.1 +0.0 N.D. +1.5 -0.5
phage EV240 +0.1 +0.1 N.D. +1.8 -0.9
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