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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
smg and yrdD are separated by 28 nucleotides
yrdD and tsaC are separated by 4 nucleotides
tsaC and aroE are separated by 4 nucleotides
aroE and yrdB overlap by 4 nucleotides
MCAODC_08070: smg - DUF494 domain-containing protein, at 1,618,719 to 1,619,192
smg
MCAODC_08075: yrdD - Uncharacterized protein YrdD, at 1,619,221 to 1,619,763
yrdD
MCAODC_08080: tsaC - L-threonylcarbamoyladenylate synthase type 1 TsaC, at 1,619,768 to 1,620,340
tsaC
MCAODC_08085: aroE - shikimate dehydrogenase, at 1,620,345 to 1,621,163
aroE
MCAODC_08090: yrdB - Uncharacterized protein YrdB, at 1,621,160 to 1,621,417
yrdB
Group
Condition
MCAODC
_08070
MCAODC
_08075
MCAODC
_08080
MCAODC
_08085
MCAODC
_08090
smg
yrdD
tsaC
aroE
yrdB
carbon source
Sodium-DL-Lactate
-0.4
-0.1
N.D.
-5.7
-0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.1
N.D.
-5.2
-0.4
carbon source
L-Arabinose
+0.1
+0.0
N.D.
-5.5
-0.2
carbon source
L-Arabinose
+0.3
+0.0
N.D.
-4.7
-0.4
carbon source
D-Glucose
-0.1
+0.1
N.D.
-4.8
+0.2
carbon source
D-Glucose
+0.1
+0.1
N.D.
-4.6
+0.3
no phage control
Control_ECRC101_WM
-0.1
-0.1
N.D.
-3.8
+0.0
phage
WM_Bas09
+0.2
-0.0
N.D.
-3.6
+0.0
phage
WM_Bas41
-0.8
-0.2
N.D.
-2.0
-0.0
carbon source
Casamino-acids
-0.2
+0.0
N.D.
-2.3
-0.3
carbon source
Casamino-acids
+0.1
-0.3
N.D.
-3.0
+0.6
phage
WM_Bas09
-0.0
+0.1
N.D.
-3.0
+0.8
phage
WM_Bas14
-0.1
+0.0
N.D.
-2.1
-0.1
no phage control
Control_ECRC101_WM
-0.1
+0.0
N.D.
-2.0
-0.1
phage
Bas14
+0.3
-0.0
N.D.
-1.2
-0.7
phage
WM_TP9
-0.2
-0.6
N.D.
-0.9
+0.2
phage
WM_TP9
-0.2
-0.5
N.D.
-1.1
+0.2
phage
WM_EV240
-0.6
-0.2
N.D.
-0.4
-0.0
phage
Bas14
-0.0
-0.2
N.D.
-1.2
+0.4
phage
Bas09
-0.4
+0.0
N.D.
-0.5
+0.1
phage
WM_RB68
-0.2
-0.1
N.D.
+0.1
-0.2
phage
Bas09
-0.1
-0.2
N.D.
-0.0
-0.1
phage
TP9
+0.3
-0.3
N.D.
-0.3
+0.7
phage
WM_EV240
-0.0
-0.0
N.D.
+0.2
+0.2
phage
EV240
-0.1
+0.0
N.D.
+1.5
-0.5
phage
EV240
+0.1
+0.1
N.D.
+1.8
-0.9
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