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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
prkB and yheU are separated by 53 nucleotides
yheU and yheT overlap by 7 nucleotides
yheT and yheS overlap by 1 nucleotides
yheS and kefG are separated by 130 nucleotides
MCAODC_07780: prkB - phosphoribulokinase, at 1,580,930 to 1,581,799
prkB
MCAODC_07785: yheU - YheU family protein, at 1,581,853 to 1,582,071
yheU
MCAODC_07790: yheT - hydrolase, at 1,582,065 to 1,583,087
yheT
MCAODC_07795: yheS - ABC transporter ATP-binding protein, at 1,583,087 to 1,585,000
yheS
MCAODC_07800: kefG - glutathione-regulated potassium-efflux system ancillary protein KefG, at 1,585,131 to 1,585,682
kefG
Group
Condition
MCAODC
_07780
MCAODC
_07785
MCAODC
_07790
MCAODC
_07795
MCAODC
_07800
prkB
yheU
yheT
yheS
kefG
carbon source
D-Glucose
-0.2
-0.2
-0.1
-0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.3
+0.0
-0.2
+0.1
carbon source
L-Arabinose
-0.1
-0.4
-0.1
+0.1
+0.2
carbon source
D-Glucose
-0.0
-0.2
-0.2
+0.1
+0.1
carbon source
L-Arabinose
-0.1
-0.3
-0.0
+0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.2
-0.2
+0.1
+0.1
-0.1
no phage control
Control_ECRC101_WM
+0.0
-0.2
-0.0
-0.0
+0.0
phage
Bas14
-0.0
-0.3
+0.1
+0.0
-0.0
no phage control
Control_ECRC101_WM
-0.1
+0.3
-0.0
-0.2
-0.1
phage
WM_Bas09
-0.3
+0.4
-0.1
-0.0
+0.0
phage
WM_RB68
-0.1
+0.2
+0.1
+0.0
-0.2
carbon source
Casamino-acids
+0.2
-0.2
+0.0
+0.2
-0.0
phage
Bas09
-0.1
+0.2
+0.1
+0.1
-0.0
phage
Bas09
-0.1
-0.0
+0.2
+0.1
+0.1
phage
WM_Bas41
-0.0
+0.2
+0.1
+0.0
-0.1
phage
WM_Bas09
-0.0
+0.3
-0.0
+0.1
+0.0
phage
WM_TP9
+0.0
+0.2
+0.1
-0.1
+0.2
phage
Bas14
+0.1
-0.1
+0.1
+0.3
-0.0
phage
WM_EV240
-0.1
+0.3
+0.2
+0.2
-0.1
carbon source
Casamino-acids
+0.4
-0.1
+0.2
-0.0
+0.1
phage
WM_Bas14
+0.0
+0.3
+0.1
+0.2
-0.0
phage
EV240
-0.1
+0.5
+0.1
+0.1
-0.0
phage
WM_EV240
-0.2
+0.3
+0.3
+0.4
-0.1
phage
WM_TP9
+0.1
+0.4
+0.1
+0.1
+0.1
phage
EV240
-0.0
+0.7
+0.3
-0.0
-0.1
phage
TP9
+0.0
+0.5
-0.1
+0.3
+0.1
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