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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
hofM and hofN overlap by 17 nucleotides
hofN and hofO overlap by 17 nucleotides
hofO and hofP overlap by 11 nucleotides
hofP and hofQ overlap by 59 nucleotides
MCAODC_07615: hofM - DNA utilization protein HofM, at 1,551,249 to 1,552,043
hofM
MCAODC_07620: hofN - Putative DNA utilization protein HofN, at 1,552,027 to 1,552,566
hofN
MCAODC_07625: hofO - DNA utilization protein HofO, at 1,552,550 to 1,552,990
hofO
MCAODC_07630: hofP - DNA utilization protein HofP, at 1,552,980 to 1,553,384
hofP
MCAODC_07635: hofQ - DNA uptake porin HofQ, at 1,553,326 to 1,554,534
hofQ
Group
Condition
MCAODC
_07615
MCAODC
_07620
MCAODC
_07625
MCAODC
_07630
MCAODC
_07635
hofM
hofN
hofO
hofP
hofQ
phage
EV240
-0.2
-0.3
-0.2
-0.2
-0.2
phage
EV240
-0.1
-0.3
-0.0
-0.3
-0.3
phage
WM_EV240
+0.0
-0.2
-0.3
-0.2
-0.0
phage
Bas09
-0.1
-0.2
-0.3
-0.1
-0.0
phage
WM_EV240
-0.3
+0.0
+0.2
-0.2
-0.3
phage
Bas09
-0.4
+0.2
-0.1
-0.0
-0.2
phage
TP9
-0.2
-0.4
+0.2
-0.0
-0.2
carbon source
Sodium-DL-Lactate
-0.3
-0.0
+0.2
-0.1
-0.2
no phage control
Control_ECRC101_WM
-0.0
-0.1
-0.2
-0.1
-0.1
carbon source
L-Arabinose
-0.2
+0.0
+0.1
-0.2
-0.1
phage
Bas14
-0.3
-0.2
+0.3
-0.0
-0.0
phage
WM_TP9
-0.1
-0.0
+0.3
-0.2
-0.1
phage
Bas14
-0.1
+0.2
-0.1
+0.0
-0.2
carbon source
L-Arabinose
-0.2
-0.0
+0.2
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.1
+0.5
-0.4
-0.1
carbon source
Casamino-acids
-0.1
-0.2
+0.2
+0.4
-0.3
phage
WM_Bas09
+0.3
-0.0
+0.2
-0.3
-0.1
phage
WM_RB68
+0.2
-0.1
+0.2
-0.1
-0.1
phage
WM_Bas14
+0.1
-0.1
+0.2
-0.0
-0.0
carbon source
D-Glucose
-0.1
+0.3
+0.5
-0.2
-0.3
carbon source
D-Glucose
+0.1
+0.2
+0.1
-0.2
+0.1
phage
WM_TP9
-0.3
+0.2
+0.5
+0.1
-0.1
phage
WM_Bas41
+0.1
-0.1
+0.5
-0.0
-0.1
phage
WM_Bas09
+0.2
+0.4
-0.1
+0.2
-0.2
no phage control
Control_ECRC101_WM
+0.0
+0.1
+0.4
+0.1
-0.1
carbon source
Casamino-acids
+0.1
+0.5
+0.2
-0.1
+0.1
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