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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
rtcA and MCAODC_07490 are separated by 49 nucleotides
MCAODC_07490 and MCAODC_07495 overlap by 10 nucleotides
MCAODC_07495 and malT are separated by 66 nucleotides
malT and malP are separated by 611 nucleotides
MCAODC_07485: rtcA - RNA 3'-terminal phosphate cyclase, at 1,516,398 to 1,517,426
rtcA
MCAODC_07490: MCAODC_07490 - GNAT family N-acetyltransferase, at 1,517,476 to 1,517,961
_07490
MCAODC_07495: MCAODC_07495 - DUF1778 domain-containing protein, at 1,517,952 to 1,518,230
_07495
MCAODC_07500: malT - HTH-type transcriptional regulator MalT, at 1,518,297 to 1,521,002
malT
MCAODC_07505: malP - maltodextrin phosphorylase, at 1,521,614 to 1,524,007
malP
Group
Condition
MCAODC
_07485
MCAODC
_07490
MCAODC
_07495
MCAODC
_07500
MCAODC
_07505
rtcA
malT
malP
phage
Bas14
-0.1
-0.0
-1.7
+0.0
-0.2
no phage control
Control_ECRC101_WM
-0.0
-0.3
-0.5
-0.0
-0.0
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.5
-0.2
+0.0
phage
Bas09
-0.0
+0.2
-0.8
+0.0
-0.1
phage
WM_RB68
-0.0
-0.1
-0.4
-0.1
+0.0
carbon source
D-Glucose
+0.0
-0.0
-0.8
+0.0
+0.2
no phage control
Control_ECRC101_WM
-0.1
-0.3
+0.2
-0.2
-0.1
phage
WM_Bas09
+0.1
-0.2
-0.2
-0.1
-0.1
phage
TP9
-0.3
+0.0
+0.0
-0.2
-0.0
phage
WM_TP9
-0.0
-0.0
-0.1
-0.2
-0.1
carbon source
L-Arabinose
-0.1
-0.2
-0.2
+0.1
+0.1
phage
WM_EV240
-0.3
-0.2
+0.1
+0.3
+0.0
carbon source
L-Arabinose
+0.1
+0.0
-0.2
-0.1
+0.1
phage
WM_Bas14
+0.1
-0.1
-0.0
-0.0
+0.0
phage
WM_EV240
-0.3
-0.4
+0.7
+0.1
+0.0
phage
WM_TP9
-0.0
+0.1
-0.1
-0.0
+0.1
phage
Bas14
-0.3
+0.2
+0.2
+0.1
-0.1
carbon source
D-Glucose
+0.2
+0.1
-0.1
-0.1
+0.0
phage
WM_Bas09
-0.1
-0.0
+0.5
-0.2
-0.1
phage
Bas09
-0.1
+0.1
+0.1
+0.2
-0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.0
+0.0
+0.0
+0.1
phage
EV240
-0.0
+0.1
+0.1
+0.0
+0.0
phage
WM_Bas41
+0.2
-0.0
+0.3
-0.0
-0.0
carbon source
Casamino-acids
+0.0
+0.2
-0.1
+0.2
+0.2
carbon source
Casamino-acids
-0.4
-0.1
+0.8
+0.1
+0.4
phage
EV240
+0.0
+0.2
+0.4
+0.5
+0.1
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