Fitness for 5 genes in Escherichia coli ECRC101

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500 ntrpoH and livJ are separated by 270 nucleotideslivJ and MCAODC_07255 are separated by 149 nucleotidesMCAODC_07255 and rimI are separated by 6 nucleotidesrimI and panM overlap by 4 nucleotides MCAODC_07245: rpoH - RNA polymerase sigma factor RpoH, at 1,466,168 to 1,467,022 rpoH MCAODC_07250: livJ - branched chain amino acid ABC transporter substrate-binding protein LivJ, at 1,467,293 to 1,468,396 livJ MCAODC_07255: MCAODC_07255 - DUF1778 domain-containing protein, at 1,468,546 to 1,468,812 _07255 MCAODC_07260: rimI - N-acetyltransferase, at 1,468,819 to 1,469,346 rimI MCAODC_07265: panM - aspartate 1-decarboxylase autocleavage activator PanM, at 1,469,343 to 1,469,726 panM
Group Condition MCAODC_07245 MCAODC_07250 MCAODC_07255 MCAODC_07260 MCAODC_07265
rpoH livJ rimI panM
carbon source Sodium-DL-Lactate N.D. -0.2 -0.4 +0.1 -1.7
carbon source D-Glucose N.D. -0.0 +0.1 +0.1 -2.1
carbon source D-Glucose N.D. +0.1 -0.1 +0.2 -1.7
carbon source Sodium-DL-Lactate N.D. -0.1 -0.0 +0.1 -1.4
carbon source Casamino-acids N.D. +0.2 +0.2 +0.1 -1.5
phage Bas14 N.D. -0.3 -0.9 +0.0 +0.0
carbon source Casamino-acids N.D. +0.2 +0.1 +0.1 -1.3
carbon source L-Arabinose N.D. -0.3 -0.2 -0.2 -0.3
phage WM_TP9 N.D. +0.0 -0.9 +0.1 +0.0
phage EV240 N.D. -0.2 -0.2 -0.2 -0.1
phage WM_Bas14 N.D. +0.0 -0.5 +0.2 -0.2
phage WM_Bas41 N.D. -0.2 -0.4 -0.1 +0.1
phage Bas14 N.D. -0.0 -0.7 -0.3 +0.4
phage EV240 N.D. -0.2 -0.3 -0.0 +0.1
phage Bas09 N.D. -0.0 -0.2 +0.3 -0.4
phage WM_Bas09 N.D. -0.2 -0.2 -0.0 +0.0
phage WM_Bas09 N.D. -0.1 +0.1 -0.1 -0.1
no phage control Control_ECRC101_WM N.D. +0.0 +0.1 -0.3 -0.1
phage WM_RB68 N.D. -0.1 -0.2 +0.1 +0.0
phage TP9 N.D. -0.2 -0.9 +0.2 +0.7
phage WM_EV240 N.D. -0.1 +0.0 +0.1 +0.1
phage Bas09 N.D. -0.1 -0.1 +0.1 +0.2
no phage control Control_ECRC101_WM N.D. -0.2 +0.4 -0.0 +0.3
phage WM_TP9 N.D. +0.2 +0.0 +0.1 +0.1
carbon source L-Arabinose N.D. +0.0 +0.4 +0.2 -0.0
phage WM_EV240 N.D. -0.1 +0.2 +0.0 +0.5
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