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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
rpoH and livJ are separated by 270 nucleotides
livJ and MCAODC_07255 are separated by 149 nucleotides
MCAODC_07255 and rimI are separated by 6 nucleotides
rimI and panM overlap by 4 nucleotides
MCAODC_07245: rpoH - RNA polymerase sigma factor RpoH, at 1,466,168 to 1,467,022
rpoH
MCAODC_07250: livJ - branched chain amino acid ABC transporter substrate-binding protein LivJ, at 1,467,293 to 1,468,396
livJ
MCAODC_07255: MCAODC_07255 - DUF1778 domain-containing protein, at 1,468,546 to 1,468,812
_07255
MCAODC_07260: rimI - N-acetyltransferase, at 1,468,819 to 1,469,346
rimI
MCAODC_07265: panM - aspartate 1-decarboxylase autocleavage activator PanM, at 1,469,343 to 1,469,726
panM
Group
Condition
MCAODC
_07245
MCAODC
_07250
MCAODC
_07255
MCAODC
_07260
MCAODC
_07265
rpoH
livJ
rimI
panM
carbon source
Sodium-DL-Lactate
N.D.
-0.2
-0.4
+0.1
-1.7
carbon source
D-Glucose
N.D.
-0.0
+0.1
+0.1
-2.1
carbon source
D-Glucose
N.D.
+0.1
-0.1
+0.2
-1.7
carbon source
Sodium-DL-Lactate
N.D.
-0.1
-0.0
+0.1
-1.4
carbon source
Casamino-acids
N.D.
+0.2
+0.2
+0.1
-1.5
phage
Bas14
N.D.
-0.3
-0.9
+0.0
+0.0
carbon source
Casamino-acids
N.D.
+0.2
+0.1
+0.1
-1.3
carbon source
L-Arabinose
N.D.
-0.3
-0.2
-0.2
-0.3
phage
WM_TP9
N.D.
+0.0
-0.9
+0.1
+0.0
phage
EV240
N.D.
-0.2
-0.2
-0.2
-0.1
phage
WM_Bas14
N.D.
+0.0
-0.5
+0.2
-0.2
phage
WM_Bas41
N.D.
-0.2
-0.4
-0.1
+0.1
phage
Bas14
N.D.
-0.0
-0.7
-0.3
+0.4
phage
EV240
N.D.
-0.2
-0.3
-0.0
+0.1
phage
Bas09
N.D.
-0.0
-0.2
+0.3
-0.4
phage
WM_Bas09
N.D.
-0.2
-0.2
-0.0
+0.0
phage
WM_Bas09
N.D.
-0.1
+0.1
-0.1
-0.1
no phage control
Control_ECRC101_WM
N.D.
+0.0
+0.1
-0.3
-0.1
phage
WM_RB68
N.D.
-0.1
-0.2
+0.1
+0.0
phage
TP9
N.D.
-0.2
-0.9
+0.2
+0.7
phage
WM_EV240
N.D.
-0.1
+0.0
+0.1
+0.1
phage
Bas09
N.D.
-0.1
-0.1
+0.1
+0.2
no phage control
Control_ECRC101_WM
N.D.
-0.2
+0.4
-0.0
+0.3
phage
WM_TP9
N.D.
+0.2
+0.0
+0.1
+0.1
carbon source
L-Arabinose
N.D.
+0.0
+0.4
+0.2
-0.0
phage
WM_EV240
N.D.
-0.1
+0.2
+0.0
+0.5
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