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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
nikE and nikD overlap by 4 nucleotides
nikD and nikC overlap by 1 nucleotides
nikC and nikB overlap by 4 nucleotides
nikB and nikA overlap by 1 nucleotides
MCAODC_07050: nikE - nickel import ATP-binding protein NikE, at 1,433,011 to 1,433,817
nikE
MCAODC_07055: nikD - nickel import ATP-binding protein NikD, at 1,433,814 to 1,434,578
nikD
MCAODC_07060: nikC - nickel ABC transporter permease subunit NikC, at 1,434,578 to 1,435,411
nikC
MCAODC_07065: nikB - nickel ABC transporter permease subunit NikB, at 1,435,408 to 1,436,352
nikB
MCAODC_07070: nikA - nickel ABC transporter substrate-binding protein, at 1,436,352 to 1,437,926
nikA
Group
Condition
MCAODC
_07050
MCAODC
_07055
MCAODC
_07060
MCAODC
_07065
MCAODC
_07070
nikE
nikD
nikC
nikB
nikA
phage
WM_Bas41
-0.1
-0.5
-0.3
-0.0
-0.3
phage
EV240
-0.2
-0.2
-0.2
-0.1
-0.2
phage
EV240
+0.1
-0.4
-0.4
+0.1
-0.2
phage
Bas14
+0.1
-0.7
-0.0
+0.0
-0.3
phage
TP9
-0.3
-0.1
-0.3
+0.0
-0.2
phage
WM_EV240
-0.0
+0.2
-0.3
-0.2
-0.1
phage
Bas14
-0.0
-0.6
+0.0
+0.3
-0.0
no phage control
Control_ECRC101_WM
+0.1
-0.2
-0.1
+0.0
-0.2
carbon source
Sodium-DL-Lactate
-0.1
-0.2
+0.1
-0.2
+0.1
phage
WM_EV240
-0.0
+0.1
-0.1
+0.0
-0.2
no phage control
Control_ECRC101_WM
+0.1
-0.2
-0.1
+0.0
+0.0
phage
WM_Bas09
-0.1
-0.1
-0.2
+0.0
+0.1
carbon source
Casamino-acids
+0.1
-0.2
-0.2
+0.0
+0.0
carbon source
D-Glucose
-0.1
-0.3
+0.2
-0.0
-0.0
phage
WM_TP9
+0.2
-0.2
-0.1
-0.0
+0.0
phage
Bas09
+0.1
-0.1
+0.1
-0.0
-0.1
phage
Bas09
+0.0
-0.2
+0.2
+0.0
-0.0
phage
WM_RB68
-0.1
+0.1
-0.0
+0.1
-0.0
phage
WM_Bas14
-0.0
+0.1
-0.2
+0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.0
-0.2
+0.2
+0.0
+0.0
carbon source
L-Arabinose
+0.0
+0.0
+0.1
-0.2
+0.2
phage
WM_Bas09
-0.2
+0.3
+0.1
-0.2
+0.1
carbon source
Casamino-acids
+0.0
+0.1
+0.3
-0.2
-0.0
phage
WM_TP9
+0.0
+0.1
-0.0
+0.1
+0.1
carbon source
D-Glucose
+0.3
+0.5
-0.2
+0.0
-0.1
carbon source
L-Arabinose
+0.1
+0.0
+0.0
+0.5
+0.0
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