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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
Pro_trna and dppA are separated by 744 nucleotides
dppA and dppB are separated by 150 nucleotides
dppB and dppC are separated by 9 nucleotides
dppC and dppD are separated by 10 nucleotides
MCAODC_06605: Pro_trna - tRNA-Pro(cgg), at 1,335,655 to 1,335,731
_trna
MCAODC_06615: dppA - dipeptide ABC transporter substrate-binding protein DppA, at 1,336,476 to 1,338,083
dppA
MCAODC_06620: dppB - dipeptide ABC transporter permease DppB, at 1,338,234 to 1,339,253
dppB
MCAODC_06625: dppC - dipeptide ABC transporter permease DppC, at 1,339,263 to 1,340,165
dppC
MCAODC_06630: dppD - dipeptide ABC transporter ATP-binding protein, at 1,340,176 to 1,341,159
dppD
Group
Condition
MCAODC
_06605
MCAODC
_06615
MCAODC
_06620
MCAODC
_06625
MCAODC
_06630
Pro_trna
dppA
dppB
dppC
dppD
phage
WM_EV240
-1.2
+0.0
-0.2
-0.6
-0.0
carbon source
D-Glucose
-1.1
-0.0
-0.1
-0.0
-0.1
phage
Bas14
-0.9
+0.0
+0.1
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.4
+0.1
-0.1
-0.3
+0.1
phage
Bas14
-0.3
-0.1
-0.0
-0.1
-0.2
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.2
-0.1
-0.0
no phage control
Control_ECRC101_WM
+0.0
-0.0
-0.2
-0.0
-0.2
carbon source
L-Arabinose
-0.7
-0.0
-0.1
+0.3
+0.1
phage
WM_Bas41
-0.7
+0.0
+0.1
+0.2
+0.0
phage
TP9
-0.1
+0.1
-0.2
-0.0
+0.0
carbon source
Casamino-acids
-0.1
-0.0
+0.0
-0.1
-0.0
carbon source
L-Arabinose
+0.2
-0.2
-0.2
+0.0
-0.0
carbon source
D-Glucose
-0.1
+0.3
+0.0
-0.2
-0.1
carbon source
Casamino-acids
+0.3
-0.1
+0.1
-0.1
-0.2
phage
Bas09
+0.4
-0.1
-0.1
-0.1
-0.0
no phage control
Control_ECRC101_WM
+0.4
-0.1
-0.0
+0.0
+0.0
phage
WM_Bas14
+0.1
-0.1
-0.0
+0.1
+0.2
phage
EV240
+1.0
-0.1
-0.1
-0.1
-0.2
phage
WM_RB68
+0.9
-0.0
-0.4
-0.1
+0.1
phage
WM_TP9
+0.6
-0.1
+0.1
-0.1
+0.1
phage
WM_Bas09
+0.4
+0.1
+0.1
+0.2
-0.2
phage
WM_TP9
+0.5
+0.0
-0.1
+0.2
-0.0
phage
WM_EV240
+0.9
-0.0
-0.1
+0.0
-0.0
phage
WM_Bas09
+0.7
-0.0
+0.1
+0.2
+0.1
phage
Bas09
+1.0
+0.0
-0.0
-0.1
+0.2
phage
EV240
+1.1
+0.1
+0.2
-0.1
-0.1
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