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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
cspA and yiaG are separated by 280 nucleotides
yiaG and yiaF are separated by 433 nucleotides
yiaF and ghrB are separated by 49 nucleotides
ghrB and yiaD are separated by 103 nucleotides
MCAODC_06520: cspA - Major cold shock protein, at 1,318,335 to 1,318,547
cspA
MCAODC_06525: yiaG - HTH-type transcriptional regulator, at 1,318,828 to 1,319,118
yiaG
MCAODC_06530: yiaF - Uncharacterized protein YiaF, at 1,319,552 to 1,320,262
yiaF
MCAODC_06535: ghrB - glyoxylate/hydroxypyruvate reductase GhrB, at 1,320,312 to 1,321,286
ghrB
MCAODC_06540: yiaD - OmpA family lipoprotein, at 1,321,390 to 1,322,049
yiaD
Group
Condition
MCAODC
_06520
MCAODC
_06525
MCAODC
_06530
MCAODC
_06535
MCAODC
_06540
cspA
yiaG
yiaF
ghrB
yiaD
phage
WM_EV240
-4.1
-0.1
-0.1
-0.3
+0.1
phage
Bas14
-1.2
-1.0
+0.1
-0.3
-0.3
carbon source
Casamino-acids
-0.5
-1.8
+0.1
-0.3
+0.1
phage
Bas09
-0.1
-1.0
-0.3
+0.1
+0.0
no phage control
Control_ECRC101_WM
-1.4
+0.3
-0.1
+0.0
+0.1
phage
Bas14
+0.8
-2.2
-0.1
+0.2
+0.2
carbon source
L-Arabinose
-0.1
-1.0
+0.0
+0.1
-0.0
carbon source
D-Glucose
-0.8
-0.2
+0.1
-0.1
+0.0
phage
WM_Bas09
-0.2
-0.5
-0.3
+0.2
+0.1
phage
WM_TP9
+0.8
-1.8
-0.0
+0.1
+0.2
phage
WM_Bas41
-1.1
+0.6
+0.1
+0.1
-0.3
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.2
+0.0
-0.3
phage
WM_EV240
-0.2
-0.4
+0.1
+0.1
-0.2
carbon source
Sodium-DL-Lactate
-0.1
-0.8
+0.2
+0.1
+0.1
phage
WM_RB68
-0.4
-0.0
-0.1
+0.1
+0.1
no phage control
Control_ECRC101_WM
+0.1
-0.7
+0.2
+0.0
+0.1
phage
WM_Bas14
+0.5
-0.7
-0.0
-0.1
-0.0
phage
TP9
-0.1
+0.0
-0.1
-0.0
+0.1
phage
EV240
+0.8
-0.9
+0.1
-0.2
+0.2
carbon source
L-Arabinose
+0.7
-0.6
-0.2
+0.1
+0.0
phage
EV240
+0.6
-0.3
-0.1
-0.1
+0.2
phage
Bas09
-0.1
+0.4
-0.0
+0.0
+0.1
phage
WM_TP9
-0.0
+0.6
+0.0
-0.0
-0.1
phage
WM_Bas09
+0.1
+0.6
+0.1
+0.2
+0.0
carbon source
D-Glucose
+0.6
+0.6
+0.1
+0.2
-0.0
carbon source
Casamino-acids
+0.7
+0.6
+0.0
+0.2
+0.0
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