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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
xylA and xylB are separated by 71 nucleotides
xylB and yiaA are separated by 168 nucleotides
yiaA and yiaA are separated by 45 nucleotides
yiaA and wecH are separated by 41 nucleotides
MCAODC_06470: xylA - xylose isomerase, at 1,309,235 to 1,310,557
xylA
MCAODC_06475: xylB - xylulokinase, at 1,310,629 to 1,312,083
xylB
MCAODC_06480: yiaA - Inner membrane protein YiaB, at 1,312,252 to 1,312,593
yiaA
MCAODC_06485: yiaA - YiaB family inner membrane protein, at 1,312,639 to 1,313,076
yiaA
MCAODC_06490: wecH - O-acetyltransferase WecH, at 1,313,118 to 1,314,113
wecH
Group
Condition
MCAODC
_06470
MCAODC
_06475
MCAODC
_06480
MCAODC
_06485
MCAODC
_06490
xylA
xylB
yiaA
yiaA
wecH
phage
Bas14
-0.3
-0.1
-0.3
-0.1
-0.2
phage
WM_Bas41
-0.1
+0.0
-0.3
-0.1
-0.2
phage
WM_EV240
-0.1
-0.0
-0.3
-0.1
-0.1
no phage control
Control_ECRC101_WM
-0.2
+0.1
-0.1
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.1
+0.0
-0.1
-0.1
phage
TP9
-0.2
+0.1
+0.1
-0.2
-0.1
phage
WM_TP9
-0.0
-0.0
-0.0
-0.2
-0.1
carbon source
Casamino-acids
-0.3
-0.1
+0.2
+0.1
-0.3
phage
WM_RB68
-0.3
-0.1
-0.0
+0.1
-0.0
phage
WM_EV240
+0.0
-0.2
+0.1
-0.2
+0.1
phage
WM_Bas09
-0.0
-0.2
-0.1
+0.0
-0.0
phage
Bas09
-0.0
-0.0
-0.0
+0.0
-0.1
phage
Bas09
-0.3
+0.0
+0.0
+0.1
-0.0
carbon source
L-Arabinose
-0.0
+0.1
+0.4
-0.4
-0.1
carbon source
Sodium-DL-Lactate
+0.0
-0.0
-0.0
+0.2
-0.2
carbon source
L-Arabinose
-0.2
-0.1
+0.1
+0.4
-0.2
phage
WM_TP9
-0.0
-0.1
+0.1
+0.1
-0.0
phage
WM_Bas14
+0.2
-0.0
+0.0
-0.0
-0.1
phage
EV240
-0.0
+0.2
+0.1
-0.1
-0.1
no phage control
Control_ECRC101_WM
+0.0
-0.0
-0.0
+0.2
-0.0
carbon source
D-Glucose
+0.0
+0.1
+0.0
+0.0
-0.0
carbon source
Casamino-acids
-0.1
-0.1
+0.1
+0.1
+0.1
phage
WM_Bas09
-0.1
-0.0
+0.3
+0.1
+0.1
phage
Bas14
+0.1
+0.1
+0.0
+0.1
+0.1
phage
EV240
+0.0
+0.3
+0.1
-0.1
+0.1
carbon source
D-Glucose
-0.0
+0.1
+0.2
+0.3
-0.0
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