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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
xylH and xylG overlap by 23 nucleotides
xylG and xylF are separated by 77 nucleotides
xylF and xylA are separated by 365 nucleotides
xylA and xylB are separated by 71 nucleotides
MCAODC_06455: xylH - xylose ABC transporter permease XylH, at 1,305,099 to 1,306,280
xylH
MCAODC_06460: xylG - D-xylose ABC transporter ATP-binding protein, at 1,306,258 to 1,307,799
xylG
MCAODC_06465: xylF - D-xylose ABC transporter substrate-binding protein, at 1,307,877 to 1,308,869
xylF
MCAODC_06470: xylA - xylose isomerase, at 1,309,235 to 1,310,557
xylA
MCAODC_06475: xylB - xylulokinase, at 1,310,629 to 1,312,083
xylB
Group
Condition
MCAODC
_06455
MCAODC
_06460
MCAODC
_06465
MCAODC
_06470
MCAODC
_06475
xylH
xylG
xylF
xylA
xylB
carbon source
Casamino-acids
-0.0
-0.3
-0.0
-0.3
-0.1
phage
WM_RB68
-0.2
+0.1
-0.1
-0.3
-0.1
phage
WM_EV240
-0.0
-0.3
-0.1
-0.1
-0.0
phage
Bas14
-0.1
-0.0
+0.0
-0.3
-0.1
phage
WM_EV240
-0.1
-0.2
+0.0
+0.0
-0.2
phage
WM_Bas09
-0.1
+0.1
-0.2
-0.0
-0.2
phage
WM_Bas09
-0.2
-0.0
-0.0
-0.1
-0.0
carbon source
L-Arabinose
-0.2
-0.0
-0.2
-0.0
+0.1
carbon source
L-Arabinose
+0.3
-0.1
-0.1
-0.2
-0.1
phage
WM_TP9
+0.0
-0.0
-0.1
-0.0
-0.1
phage
WM_Bas41
-0.1
+0.2
-0.1
-0.1
+0.0
phage
WM_TP9
+0.1
-0.1
-0.1
-0.0
-0.0
carbon source
Sodium-DL-Lactate
-0.1
+0.1
+0.1
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.1
+0.0
-0.0
carbon source
Casamino-acids
-0.2
+0.1
+0.2
-0.1
-0.1
carbon source
D-Glucose
+0.0
-0.2
-0.0
-0.0
+0.1
phage
TP9
-0.1
+0.1
+0.1
-0.2
+0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
-0.0
+0.0
-0.0
phage
Bas09
+0.2
+0.0
+0.1
-0.3
+0.0
phage
Bas09
+0.2
-0.0
-0.0
-0.0
-0.0
no phage control
Control_ECRC101_WM
+0.2
+0.0
+0.0
-0.2
+0.1
phage
WM_Bas14
-0.1
+0.0
-0.0
+0.2
-0.0
phage
Bas14
-0.1
-0.1
+0.2
+0.1
+0.1
phage
EV240
+0.1
-0.1
+0.1
-0.0
+0.2
carbon source
D-Glucose
+0.2
+0.1
-0.1
+0.0
+0.1
phage
EV240
+0.1
+0.2
+0.0
+0.0
+0.3
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