Fitness for 5 genes in Escherichia coli ECRC101

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500 ntxylH and xylG overlap by 23 nucleotidesxylG and xylF are separated by 77 nucleotidesxylF and xylA are separated by 365 nucleotidesxylA and xylB are separated by 71 nucleotides MCAODC_06455: xylH - xylose ABC transporter permease XylH, at 1,305,099 to 1,306,280 xylH MCAODC_06460: xylG - D-xylose ABC transporter ATP-binding protein, at 1,306,258 to 1,307,799 xylG MCAODC_06465: xylF - D-xylose ABC transporter substrate-binding protein, at 1,307,877 to 1,308,869 xylF MCAODC_06470: xylA - xylose isomerase, at 1,309,235 to 1,310,557 xylA MCAODC_06475: xylB - xylulokinase, at 1,310,629 to 1,312,083 xylB
Group Condition MCAODC_06455 MCAODC_06460 MCAODC_06465 MCAODC_06470 MCAODC_06475
xylH xylG xylF xylA xylB
carbon source Casamino-acids -0.0 -0.3 -0.0 -0.3 -0.1
phage WM_RB68 -0.2 +0.1 -0.1 -0.3 -0.1
phage WM_EV240 -0.0 -0.3 -0.1 -0.1 -0.0
phage Bas14 -0.1 -0.0 +0.0 -0.3 -0.1
phage WM_EV240 -0.1 -0.2 +0.0 +0.0 -0.2
phage WM_Bas09 -0.1 +0.1 -0.2 -0.0 -0.2
phage WM_Bas09 -0.2 -0.0 -0.0 -0.1 -0.0
carbon source L-Arabinose -0.2 -0.0 -0.2 -0.0 +0.1
carbon source L-Arabinose +0.3 -0.1 -0.1 -0.2 -0.1
phage WM_TP9 +0.0 -0.0 -0.1 -0.0 -0.1
phage WM_Bas41 -0.1 +0.2 -0.1 -0.1 +0.0
phage WM_TP9 +0.1 -0.1 -0.1 -0.0 -0.0
carbon source Sodium-DL-Lactate -0.1 +0.1 +0.1 -0.2 -0.1
carbon source Sodium-DL-Lactate -0.0 -0.0 -0.1 +0.0 -0.0
carbon source Casamino-acids -0.2 +0.1 +0.2 -0.1 -0.1
carbon source D-Glucose +0.0 -0.2 -0.0 -0.0 +0.1
phage TP9 -0.1 +0.1 +0.1 -0.2 +0.1
no phage control Control_ECRC101_WM +0.1 -0.1 -0.0 +0.0 -0.0
phage Bas09 +0.2 +0.0 +0.1 -0.3 +0.0
phage Bas09 +0.2 -0.0 -0.0 -0.0 -0.0
no phage control Control_ECRC101_WM +0.2 +0.0 +0.0 -0.2 +0.1
phage WM_Bas14 -0.1 +0.0 -0.0 +0.2 -0.0
phage Bas14 -0.1 -0.1 +0.2 +0.1 +0.1
phage EV240 +0.1 -0.1 +0.1 -0.0 +0.2
carbon source D-Glucose +0.2 +0.1 -0.1 +0.0 +0.1
phage EV240 +0.1 +0.2 +0.0 +0.0 +0.3
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