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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yicC and rph are separated by 126 nucleotides
rph and pyrL are separated by 15 nucleotides
pyrL and pyrE are separated by 11 nucleotides
pyrE and slmA are separated by 36 nucleotides
MCAODC_06095: yicC - UPF0701 protein YicC, at 1,224,772 to 1,225,635
yicC
MCAODC_06100: rph - ribonuclease PH, at 1,225,762 to 1,226,478
rph
MCAODC_06105: pyrL - Putative PyrE leader peptide, at 1,226,494 to 1,226,532
pyrL
MCAODC_06110: pyrE - Orotate phosphoribosyltransferase, at 1,226,544 to 1,227,185
pyrE
MCAODC_06115: slmA - nucleoid occlusion factor SlmA, at 1,227,222 to 1,227,818
slmA
Group
Condition
MCAODC
_06095
MCAODC
_06100
MCAODC
_06105
MCAODC
_06110
MCAODC
_06115
yicC
rph
pyrL
pyrE
slmA
carbon source
Sodium-DL-Lactate
+0.6
-0.2
-0.1
-7.4
-0.6
carbon source
D-Glucose
-0.0
-0.7
+0.0
-6.0
-0.3
carbon source
D-Glucose
-0.4
-1.0
+0.1
-4.7
-0.7
carbon source
Casamino-acids
+0.4
-1.0
+0.6
-5.0
-0.2
carbon source
L-Arabinose
+0.0
-0.2
-0.2
-3.9
-0.6
carbon source
L-Arabinose
-0.0
-0.6
-0.5
-2.9
-0.4
carbon source
Sodium-DL-Lactate
+0.5
-0.6
+1.1
-5.0
-0.2
carbon source
Casamino-acids
+0.4
-1.0
+0.9
-3.3
-0.4
phage
Bas09
-0.3
+0.2
-1.9
+0.2
-0.3
phage
Bas09
-0.1
-0.7
-0.7
-0.1
+0.0
phage
WM_Bas41
-0.1
+0.6
-1.8
-0.7
+0.5
phage
TP9
-0.1
-0.6
-0.3
-0.3
+0.1
phage
Bas14
-0.1
+0.0
-1.2
-0.2
+0.4
phage
Bas14
-0.1
-0.3
-0.6
-0.1
+0.3
phage
WM_EV240
-0.1
-0.0
-0.1
-0.6
+0.2
phage
EV240
-1.2
+1.6
-1.1
+0.0
-0.0
phage
WM_Bas09
+0.2
-0.2
+0.3
-0.2
+0.0
phage
WM_Bas14
+0.2
+0.6
-0.9
+0.1
+0.2
no phage control
Control_ECRC101_WM
+0.2
-0.2
+0.5
-0.3
+0.1
phage
WM_Bas09
+0.2
+0.3
-0.0
-0.0
+0.0
phage
WM_TP9
+0.5
+0.4
-0.2
-0.1
-0.0
no phage control
Control_ECRC101_WM
+0.3
+0.5
-0.0
-0.1
-0.1
phage
WM_RB68
+0.3
+0.4
-0.3
-0.0
+0.2
phage
WM_TP9
+0.6
+0.3
-0.4
-0.0
+0.3
phage
WM_EV240
+0.1
+0.2
+0.6
-0.3
+0.3
phage
EV240
-0.9
+1.3
+0.4
+0.1
+0.0
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