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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ilvY and ilvA are separated by 51 nucleotides
ilvA and ilvD are separated by 2 nucleotides
ilvD and ilvE are separated by 64 nucleotides
ilvE and MCAODC_05155 are separated by 19 nucleotides
MCAODC_05135: ilvY - HTH-type transcriptional activator IlvY, at 1,034,915 to 1,035,808
ilvY
MCAODC_05140: ilvA - threonine ammonia-lyase, biosynthetic, at 1,035,860 to 1,037,404
ilvA
MCAODC_05145: ilvD - dihydroxy-acid dehydratase, at 1,037,407 to 1,039,257
ilvD
MCAODC_05150: ilvE - branched-chain-amino-acid transaminase, at 1,039,322 to 1,040,251
ilvE
MCAODC_05155: MCAODC_05155 - Acetolactate synthase isozyme 2 small subunit, at 1,040,271 to 1,040,534
_05155
Group
Condition
MCAODC
_05135
MCAODC
_05140
MCAODC
_05145
MCAODC
_05150
MCAODC
_05155
ilvY
ilvA
ilvD
ilvE
carbon source
Sodium-DL-Lactate
-1.5
-3.5
-3.5
-5.0
-0.8
carbon source
L-Arabinose
-2.4
-3.4
-2.9
-4.6
-0.8
carbon source
D-Glucose
-2.0
-3.1
-3.8
-3.9
-1.1
carbon source
Sodium-DL-Lactate
-1.5
-3.1
-3.4
-4.4
-1.0
carbon source
D-Glucose
-2.1
-3.9
-2.9
-3.4
-0.5
carbon source
L-Arabinose
-1.8
-2.9
-2.5
-3.4
-1.0
no phage control
Control_ECRC101_WM
-1.5
-2.0
-2.1
-2.8
-1.0
no phage control
Control_ECRC101_WM
-1.5
-1.5
-1.8
-2.6
-0.5
phage
WM_Bas09
-0.6
-0.5
-0.6
-0.9
-0.4
phage
WM_Bas09
-0.3
-0.6
-0.6
-0.7
-0.2
phage
WM_TP9
-0.1
-0.6
-0.7
-0.5
-0.2
phage
WM_Bas14
-0.3
-0.4
-0.5
-0.5
-0.2
phage
WM_RB68
-0.3
-0.3
-0.5
-0.1
-0.3
phage
WM_TP9
-0.1
-0.3
-0.3
+0.1
-0.4
phage
Bas14
-0.1
-0.2
+0.2
-0.2
-0.4
phage
Bas14
-0.4
-0.0
+0.0
+0.1
-0.1
phage
TP9
+0.0
+0.0
+0.1
-0.2
-0.2
phage
WM_Bas41
-0.3
+0.1
+0.0
+0.1
-0.2
phage
EV240
+0.3
-0.2
-0.0
-0.0
-0.3
phage
WM_EV240
+0.0
+0.0
+0.0
+0.0
-0.2
phage
Bas09
+0.1
-0.0
+0.0
+0.0
-0.2
carbon source
Casamino-acids
-0.2
+0.2
+0.0
+0.0
+0.1
carbon source
Casamino-acids
-0.0
+0.2
-0.0
+0.1
+0.1
phage
EV240
+0.5
-0.3
+0.0
+0.0
+0.2
phage
WM_EV240
+0.2
-0.0
+0.1
+0.3
-0.0
phage
Bas09
+0.2
+0.1
+0.2
+0.1
+0.0
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