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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
trxA and rhlB are separated by 130 nucleotides
rhlB and gppA are separated by 135 nucleotides
gppA and rep are separated by 46 nucleotides
rep and yifN are separated by 216 nucleotides
MCAODC_05100: trxA - thioredoxin TrxA, at 1,026,685 to 1,027,014
trxA
MCAODC_05105: rhlB - ATP-dependent RNA helicase RhlB, at 1,027,145 to 1,028,410
rhlB
MCAODC_05110: gppA - guanosine-5'-triphosphate,3'-diphosphate diphosphatase, at 1,028,546 to 1,030,030
gppA
MCAODC_05115: rep - DNA helicase Rep, at 1,030,077 to 1,032,098
rep
MCAODC_05120: yifN - Putative uncharacterized protein YifN, at 1,032,315 to 1,032,764
yifN
Group
Condition
MCAODC
_05100
MCAODC
_05105
MCAODC
_05110
MCAODC
_05115
MCAODC
_05120
trxA
rhlB
gppA
rep
yifN
phage
WM_TP9
-3.0
-0.7
-0.3
N.D.
-0.0
phage
WM_TP9
-2.4
-0.7
-0.4
N.D.
-0.1
phage
TP9
-2.8
-0.3
-0.1
N.D.
+0.0
phage
WM_EV240
-1.1
-1.0
-0.1
N.D.
-0.3
carbon source
L-Arabinose
-1.7
-0.4
-0.6
N.D.
+0.2
carbon source
L-Arabinose
-1.6
-0.2
-0.8
N.D.
+0.3
phage
WM_Bas09
-1.6
-0.8
-0.3
N.D.
+0.3
carbon source
Sodium-DL-Lactate
-1.5
-0.5
-0.2
N.D.
+0.0
phage
WM_Bas41
-2.1
-0.2
+0.0
N.D.
+0.2
carbon source
Sodium-DL-Lactate
-1.4
-0.4
-0.3
N.D.
+0.1
phage
Bas14
-1.3
-0.5
-0.2
N.D.
+0.0
no phage control
Control_ECRC101_WM
-1.3
-0.5
+0.0
N.D.
-0.1
phage
WM_EV240
-0.9
-1.1
+0.0
N.D.
+0.0
phage
WM_Bas09
-1.2
-0.6
-0.1
N.D.
+0.1
no phage control
Control_ECRC101_WM
-1.0
-0.7
-0.1
N.D.
+0.1
phage
WM_Bas14
-1.2
-0.6
-0.1
N.D.
+0.2
phage
Bas09
-0.8
-0.8
-0.0
N.D.
+0.1
carbon source
D-Glucose
-1.1
-0.2
-0.4
N.D.
+0.1
carbon source
D-Glucose
-0.8
-0.3
-0.6
N.D.
+0.2
phage
WM_RB68
-0.6
-0.6
-0.0
N.D.
-0.1
phage
Bas14
-0.1
-0.5
-0.4
N.D.
-0.0
carbon source
Casamino-acids
-0.1
-0.2
-0.4
N.D.
+0.2
phage
Bas09
+0.7
-0.5
-0.3
N.D.
-0.0
carbon source
Casamino-acids
+0.3
-0.3
+0.1
N.D.
+0.1
phage
EV240
+1.5
-0.8
+0.0
N.D.
-0.2
phage
EV240
+1.6
-1.0
-0.0
N.D.
+0.1
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