Fitness for 5 genes in Escherichia coli ECRC101

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500 ntuvrD and yigB are separated by 83 nucleotidesyigB and xerC overlap by 1 nucleotidesxerC and yigA overlap by 4 nucleotidesyigA and dapF overlap by 4 nucleotides MCAODC_04915: uvrD - DNA helicase II, at 992,347 to 994,509 uvrD MCAODC_04920: yigB - 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, at 994,593 to 995,309 yigB MCAODC_04925: xerC - tyrosine recombinase XerC, at 995,309 to 996,205 xerC MCAODC_04930: yigA - Uncharacterized protein YigA, at 996,202 to 996,909 yigA MCAODC_04935: dapF - diaminopimelate epimerase, at 996,906 to 997,730 dapF
Group Condition MCAODC_04915 MCAODC_04920 MCAODC_04925 MCAODC_04930 MCAODC_04935
uvrD yigB xerC yigA dapF
carbon source Casamino-acids -2.0 -0.2 N.D. -0.1 N.D.
carbon source D-Glucose -1.5 -0.1 N.D. -0.6 N.D.
carbon source L-Arabinose -1.7 -0.1 N.D. -0.3 N.D.
carbon source Sodium-DL-Lactate -1.5 -0.1 N.D. -0.5 N.D.
carbon source Sodium-DL-Lactate -1.5 -0.2 N.D. -0.3 N.D.
phage TP9 -1.8 -0.3 N.D. +0.1 N.D.
phage WM_TP9 -1.9 +0.1 N.D. -0.0 N.D.
carbon source L-Arabinose -1.4 -0.0 N.D. -0.2 N.D.
carbon source Casamino-acids -1.5 +0.1 N.D. -0.3 N.D.
carbon source D-Glucose -1.3 -0.0 N.D. -0.3 N.D.
phage WM_Bas41 -1.1 +0.1 N.D. -0.4 N.D.
phage WM_TP9 -1.2 -0.0 N.D. -0.1 N.D.
phage Bas09 -0.9 -0.2 N.D. +0.1 N.D.
phage WM_Bas14 -1.0 +0.1 N.D. -0.2 N.D.
no phage control Control_ECRC101_WM -0.7 -0.1 N.D. -0.1 N.D.
phage WM_Bas09 -0.7 -0.0 N.D. -0.2 N.D.
phage Bas09 -0.4 -0.2 N.D. -0.2 N.D.
phage EV240 -0.7 -0.2 N.D. +0.2 N.D.
phage EV240 -0.6 -0.1 N.D. -0.0 N.D.
phage WM_Bas09 -0.6 +0.1 N.D. -0.1 N.D.
phage WM_EV240 -0.6 +0.1 N.D. +0.1 N.D.
phage WM_EV240 -0.3 -0.0 N.D. +0.1 N.D.
phage WM_RB68 -0.5 +0.3 N.D. +0.1 N.D.
phage Bas14 -0.4 -0.1 N.D. +0.4 N.D.
no phage control Control_ECRC101_WM -0.3 +0.1 N.D. +0.3 N.D.
phage Bas14 +0.3 -0.2 N.D. +0.2 N.D.
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