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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
melB and yihO are separated by 39 nucleotides
yihO and ompL are separated by 0 nucleotides
ompL and yihN are separated by 90 nucleotides
yihN and yihM are separated by 101 nucleotides
MCAODC_04555: melB - MFS/sugar transport protein, at 923,161 to 924,546
melB
MCAODC_04560: yihO - Putative sulfoquinovose importer, at 924,586 to 925,989
yihO
MCAODC_04565: ompL - porin OmpL, at 925,990 to 926,748
ompL
MCAODC_04570: yihN - Inner membrane protein YihN, at 926,839 to 928,104
yihN
MCAODC_04575: yihM - Uncharacterized protein YihM, at 928,206 to 929,186
yihM
Group
Condition
MCAODC
_04555
MCAODC
_04560
MCAODC
_04565
MCAODC
_04570
MCAODC
_04575
melB
yihO
ompL
yihN
yihM
phage
Bas14
-0.1
-0.2
-0.1
-0.2
+0.2
phage
WM_EV240
+0.1
-0.2
-0.1
-0.1
-0.0
phage
Bas14
-0.2
-0.1
+0.1
-0.1
+0.1
phage
WM_RB68
-0.1
+0.2
+0.2
-0.0
-0.2
phage
Bas09
-0.1
-0.1
+0.1
-0.1
+0.2
phage
WM_Bas09
+0.0
-0.1
+0.0
+0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.0
+0.0
+0.1
-0.0
+0.0
carbon source
Casamino-acids
-0.2
+0.1
+0.0
+0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.0
+0.2
+0.0
+0.1
-0.3
phage
WM_TP9
+0.0
+0.1
+0.2
+0.0
-0.2
phage
WM_Bas14
+0.1
+0.2
-0.0
-0.1
-0.1
phage
WM_EV240
+0.3
+0.1
-0.1
-0.0
-0.1
phage
Bas09
+0.0
+0.1
+0.2
-0.1
-0.0
carbon source
L-Arabinose
+0.0
-0.0
+0.1
-0.0
+0.2
phage
WM_Bas41
+0.1
-0.1
+0.1
+0.2
-0.0
phage
TP9
+0.1
+0.2
+0.0
-0.1
+0.1
phage
WM_TP9
+0.1
-0.0
+0.2
+0.1
+0.1
phage
EV240
-0.1
+0.0
+0.3
+0.1
+0.1
no phage control
Control_ECRC101_WM
+0.1
-0.0
+0.1
+0.0
+0.2
phage
WM_Bas09
-0.0
+0.2
+0.2
+0.2
-0.1
carbon source
D-Glucose
+0.2
+0.3
-0.1
+0.2
+0.0
no phage control
Control_ECRC101_WM
-0.0
+0.0
+0.3
+0.1
+0.2
carbon source
Casamino-acids
+0.0
+0.2
+0.2
-0.0
+0.2
phage
EV240
-0.0
+0.1
+0.3
-0.0
+0.2
carbon source
D-Glucose
+0.2
+0.0
+0.1
+0.2
+0.2
carbon source
L-Arabinose
+0.2
+0.1
+0.3
-0.0
+0.2
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