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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
dtd and yihY overlap by 4 nucleotides
yihY and yihX overlap by 7 nucleotides
yihX and csqR are separated by 98 nucleotides
csqR and yihV are separated by 33 nucleotides
MCAODC_04500: dtd - D-aminoacyl-tRNA deacylase, at 912,130 to 912,567
dtd
MCAODC_04505: yihY - virulence factor BrkB family protein, at 912,564 to 913,436
yihY
MCAODC_04510: yihX - glucose-1-phosphatase, at 913,430 to 914,029
yihX
MCAODC_04515: csqR - HTH-type transcriptional repressor CsqR, at 914,128 to 914,913
csqR
MCAODC_04520: yihV - sulfofructose kinase, at 914,947 to 915,843
yihV
Group
Condition
MCAODC
_04500
MCAODC
_04505
MCAODC
_04510
MCAODC
_04515
MCAODC
_04520
dtd
yihY
yihX
csqR
yihV
phage
TP9
-0.5
+0.0
-0.3
-0.4
-0.1
phage
EV240
+0.3
-0.1
-0.5
-0.3
-0.1
phage
Bas09
-0.2
+0.1
-0.1
-0.7
+0.1
phage
WM_EV240
-0.1
+0.0
-0.3
-0.1
+0.0
phage
EV240
-0.1
+0.1
-0.3
-0.3
+0.1
carbon source
Casamino-acids
+0.2
-0.0
+0.1
-0.6
-0.0
phage
WM_TP9
-0.2
+0.1
-0.0
+0.1
-0.2
phage
WM_EV240
+0.1
+0.0
-0.1
+0.0
-0.3
carbon source
L-Arabinose
+0.1
-0.2
-0.1
-0.1
+0.1
phage
Bas09
-0.3
+0.1
+0.0
-0.2
+0.1
phage
WM_TP9
+0.1
-0.1
+0.1
-0.1
-0.1
phage
WM_Bas09
+0.0
-0.1
+0.0
-0.0
-0.0
carbon source
Sodium-DL-Lactate
+0.3
+0.0
-0.1
-0.2
-0.1
carbon source
D-Glucose
+0.3
+0.1
+0.0
-0.5
+0.1
phage
Bas14
+0.1
+0.2
-0.1
-0.3
+0.0
phage
WM_Bas41
+0.0
+0.1
+0.0
+0.1
-0.1
phage
WM_RB68
+0.1
-0.0
-0.2
+0.3
-0.1
phage
WM_Bas14
+0.3
+0.1
-0.1
-0.1
-0.1
carbon source
L-Arabinose
+0.5
-0.1
-0.1
-0.2
+0.0
carbon source
D-Glucose
+0.1
+0.0
+0.0
-0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.4
+0.0
-0.0
-0.1
-0.0
no phage control
Control_ECRC101_WM
+0.1
+0.2
+0.1
-0.0
-0.1
carbon source
Casamino-acids
+0.4
+0.1
+0.2
-0.4
-0.0
no phage control
Control_ECRC101_WM
+0.1
+0.1
+0.0
+0.1
-0.0
phage
WM_Bas09
+0.1
+0.2
-0.0
+0.1
+0.0
phage
Bas14
+0.3
-0.0
+0.2
-0.2
+0.3
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