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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yiiE and MCAODC_04485 are separated by 693 nucleotides
MCAODC_04485 and MCAODC_04490 are separated by 6 nucleotides
MCAODC_04490 and fabY are separated by 410 nucleotides
fabY and dtd are separated by 44 nucleotides
MCAODC_04480: yiiE - Uncharacterized protein YiiE, at 908,007 to 908,225
yiiE
MCAODC_04485: MCAODC_04485 - Transposase, at 908,919 to 909,833
_04485
MCAODC_04490: MCAODC_04490 - hypothetical protein, at 909,840 to 910,733
_04490
MCAODC_04495: fabY - fatty acid biosynthesis protein FabY, at 911,144 to 912,085
fabY
MCAODC_04500: dtd - D-aminoacyl-tRNA deacylase, at 912,130 to 912,567
dtd
Group
Condition
MCAODC
_04480
MCAODC
_04485
MCAODC
_04490
MCAODC
_04495
MCAODC
_04500
yiiE
fabY
dtd
phage
WM_EV240
-1.6
-0.2
-0.5
+0.1
-0.1
phage
Bas09
-1.0
-0.2
-0.1
+0.1
-0.2
phage
Bas09
-0.7
-0.1
-0.2
+0.0
-0.3
phage
TP9
-0.4
-0.2
+0.2
-0.0
-0.5
carbon source
Sodium-DL-Lactate
-0.2
-0.0
-0.4
-0.3
+0.3
phage
EV240
-0.6
+0.1
-0.0
+0.0
-0.1
phage
WM_TP9
-0.1
-0.1
-0.2
+0.1
-0.2
phage
WM_Bas41
+0.5
-0.3
-0.7
-0.1
+0.0
phage
WM_EV240
-0.3
+0.1
-0.1
-0.1
+0.1
phage
WM_TP9
-0.7
-0.1
+0.3
+0.2
+0.1
phage
WM_Bas09
-0.1
-0.3
-0.1
+0.2
+0.0
carbon source
Casamino-acids
-0.4
-0.0
-0.3
+0.4
+0.2
phage
WM_Bas14
-0.7
+0.2
+0.0
+0.1
+0.3
carbon source
L-Arabinose
-0.1
-0.1
+0.0
+0.0
+0.1
carbon source
Sodium-DL-Lactate
-0.3
+0.1
+0.2
-0.4
+0.4
phage
Bas14
+0.4
+0.0
-0.4
-0.0
+0.1
carbon source
D-Glucose
-0.1
+0.3
-0.3
-0.0
+0.3
no phage control
Control_ECRC101_WM
-0.2
-0.3
+0.6
+0.2
+0.1
phage
WM_RB68
+0.6
-0.3
-0.1
+0.1
+0.1
phage
WM_Bas09
+0.4
+0.1
-0.3
+0.2
+0.1
phage
EV240
+0.2
+0.1
-0.0
-0.1
+0.3
no phage control
Control_ECRC101_WM
+0.5
+0.0
-0.2
+0.2
+0.1
carbon source
Casamino-acids
+0.3
+0.2
-0.2
+0.2
+0.4
carbon source
L-Arabinose
-0.2
+0.5
-0.1
+0.2
+0.5
phage
Bas14
+0.9
-0.5
+0.3
-0.1
+0.3
carbon source
D-Glucose
+1.1
+0.1
-0.2
+0.1
+0.1
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