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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
argH and MCAODC_04080 are separated by 60 nucleotides
MCAODC_04080 and argC are separated by 10 nucleotides
argC and argE are separated by 153 nucleotides
argE and ppc are separated by 351 nucleotides
MCAODC_04075: argH - argininosuccinate lyase, at 821,292 to 822,665
argH
MCAODC_04080: MCAODC_04080 - acetylglutamate kinase, at 822,726 to 823,499
_04080
MCAODC_04085: argC - N-acetyl-gamma-glutamyl-phosphate reductase, at 823,510 to 824,514
argC
MCAODC_04090: argE - acetylornithine deacetylase, at 824,668 to 825,819
argE
MCAODC_04095: ppc - phosphoenolpyruvate carboxylase, at 826,171 to 828,822
ppc
Group
Condition
MCAODC
_04075
MCAODC
_04080
MCAODC
_04085
MCAODC
_04090
MCAODC
_04095
argH
argC
argE
ppc
carbon source
Sodium-DL-Lactate
-4.2
-3.6
-3.2
-3.3
-5.6
carbon source
Sodium-DL-Lactate
-5.0
-3.3
-3.3
-3.2
-4.6
carbon source
L-Arabinose
-4.1
-3.5
-3.5
-3.0
-3.0
carbon source
D-Glucose
-2.9
-3.2
-2.7
-2.7
-4.1
carbon source
D-Glucose
-3.8
-3.1
-1.8
-2.9
-3.9
carbon source
L-Arabinose
-2.8
-2.9
-3.3
-2.5
-3.0
phage
WM_Bas09
-2.3
-1.2
-1.8
-0.7
-0.3
no phage control
Control_ECRC101_WM
-1.6
-1.5
-1.3
-1.1
-0.3
no phage control
Control_ECRC101_WM
-1.3
-1.2
-1.2
-1.0
-0.4
phage
WM_Bas09
-2.0
-0.9
-1.2
-0.8
-0.1
phage
WM_TP9
-1.4
-1.1
-0.9
-0.6
-0.1
phage
WM_Bas14
-1.8
-0.8
-0.8
-0.6
+0.0
phage
WM_EV240
-1.2
-0.8
-0.8
-0.7
-0.2
phage
WM_Bas41
-0.6
-0.5
-0.8
-0.3
-0.2
phage
WM_TP9
-0.7
-0.7
-0.7
-0.4
+0.1
phage
WM_EV240
-0.4
-0.4
-0.9
-0.5
-0.1
phage
TP9
-0.1
-0.0
-0.3
-0.2
+0.1
phage
Bas09
+0.0
-0.0
-0.4
+0.0
-0.0
phage
WM_RB68
+0.5
-0.1
-0.5
-0.2
+0.1
phage
Bas09
+0.0
-0.2
-0.2
+0.0
+0.1
phage
EV240
-0.1
+0.1
-0.1
-0.0
+0.0
phage
Bas14
-0.3
+0.3
-0.1
-0.1
+0.2
carbon source
Casamino-acids
-0.2
+0.0
-0.0
+0.1
+0.1
phage
Bas14
-0.1
-0.0
+0.0
-0.2
+0.3
phage
EV240
+0.1
-0.0
+0.0
+0.3
-0.2
carbon source
Casamino-acids
+0.2
+0.0
+0.2
-0.1
-0.0
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