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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
yijD and fabR overlap by 1 nucleotides
fabR and araJ are separated by 49 nucleotides
araJ and abgB are separated by 42 nucleotides
abgB and sthA are separated by 329 nucleotides
MCAODC_04040: yijD - YijD family membrane protein, at 814,757 to 815,116
yijD
MCAODC_04045: fabR - HTH-type transcriptional repressor FabR, at 815,116 to 815,820
fabR
MCAODC_04050: araJ - MFS transporter, at 815,870 to 817,186
araJ
MCAODC_04055: abgB - amidohydrolase, at 817,229 to 818,395
abgB
MCAODC_04060: sthA - Si-specific NAD(P)(+) transhydrogenase, at 818,725 to 820,125
sthA
Group
Condition
MCAODC
_04040
MCAODC
_04045
MCAODC
_04050
MCAODC
_04055
MCAODC
_04060
yijD
fabR
araJ
abgB
sthA
phage
Bas14
-0.3
-2.1
-0.1
-0.2
-1.1
carbon source
Casamino-acids
+0.2
+0.3
-0.0
-0.2
-3.9
carbon source
Casamino-acids
-0.0
+0.9
-0.0
-0.2
-4.0
phage
Bas14
-0.1
-1.7
-0.1
+0.0
-1.4
phage
TP9
-0.2
+0.0
-0.1
-0.1
-1.6
phage
WM_Bas41
-0.1
+0.3
+0.0
-0.1
-1.3
carbon source
Sodium-DL-Lactate
-0.4
+0.7
-0.1
-0.0
-1.1
phage
Bas09
-0.6
+1.3
-0.1
-0.1
-0.9
carbon source
D-Glucose
+0.1
+0.0
-0.1
+0.1
-0.6
phage
WM_TP9
-0.1
+0.3
-0.1
-0.1
-0.4
carbon source
L-Arabinose
+0.1
+0.1
-0.0
-0.0
-0.5
phage
Bas09
-0.4
+0.4
+0.0
+0.2
-0.4
carbon source
L-Arabinose
+0.0
+0.3
+0.1
-0.1
-0.4
phage
WM_Bas09
+0.0
+0.3
+0.0
+0.1
-0.5
carbon source
Sodium-DL-Lactate
+0.3
+0.6
-0.1
-0.1
-0.7
phage
WM_Bas14
-0.3
+0.2
+0.0
-0.1
+0.1
no phage control
Control_ECRC101_WM
+0.1
+0.3
+0.0
-0.1
-0.3
carbon source
D-Glucose
+0.2
+0.2
-0.0
-0.0
-0.2
no phage control
Control_ECRC101_WM
-0.0
+0.2
+0.1
+0.0
-0.1
phage
WM_Bas09
-0.2
+0.2
+0.0
-0.0
+0.2
phage
WM_TP9
+0.4
+0.5
+0.0
-0.0
-0.4
phage
WM_RB68
+0.0
+0.4
-0.0
-0.1
+0.0
phage
WM_EV240
-0.2
+1.7
+0.1
-0.0
-0.3
phage
WM_EV240
+0.3
+1.4
+0.1
+0.0
-0.3
phage
EV240
-0.2
+1.9
+0.1
-0.2
-0.1
phage
EV240
-0.0
+1.9
-0.1
-0.0
-0.2
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