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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
murI and btuB overlap by 56 nucleotides
btuB and trmA are separated by 368 nucleotides
trmA and yijD are separated by 39 nucleotides
yijD and fabR overlap by 1 nucleotides
MCAODC_04025: murI - glutamate racemase, at 810,602 to 811,459
murI
MCAODC_04030: btuB - TonB-dependent vitamin B12 receptor BtuB, at 811,404 to 813,248
btuB
MCAODC_04035: trmA - tRNA (uridine(54)-C5)-methyltransferase TrmA, at 813,617 to 814,717
trmA
MCAODC_04040: yijD - YijD family membrane protein, at 814,757 to 815,116
yijD
MCAODC_04045: fabR - HTH-type transcriptional repressor FabR, at 815,116 to 815,820
fabR
Group
Condition
MCAODC
_04025
MCAODC
_04030
MCAODC
_04035
MCAODC
_04040
MCAODC
_04045
murI
btuB
trmA
yijD
fabR
phage
Bas14
N.D.
-0.1
+0.0
-0.3
-2.1
phage
Bas14
N.D.
-0.2
-0.0
-0.1
-1.7
phage
TP9
N.D.
-0.2
-0.4
-0.2
+0.0
phage
WM_Bas14
N.D.
-0.4
+0.0
-0.3
+0.2
phage
Bas09
N.D.
+0.0
-0.5
-0.4
+0.4
phage
WM_Bas09
N.D.
-0.3
+0.1
-0.2
+0.2
no phage control
Control_ECRC101_WM
N.D.
-0.4
+0.1
-0.0
+0.2
phage
WM_Bas41
N.D.
-0.2
-0.1
-0.1
+0.3
phage
WM_Bas09
N.D.
-0.4
-0.0
+0.0
+0.3
carbon source
D-Glucose
N.D.
-0.3
+0.1
+0.1
+0.0
phage
WM_TP9
N.D.
-0.3
+0.0
-0.1
+0.3
no phage control
Control_ECRC101_WM
N.D.
-0.3
-0.1
+0.1
+0.3
carbon source
D-Glucose
N.D.
-0.2
-0.1
+0.2
+0.2
carbon source
L-Arabinose
N.D.
-0.3
+0.1
+0.1
+0.1
carbon source
Sodium-DL-Lactate
N.D.
-0.2
-0.1
-0.4
+0.7
carbon source
L-Arabinose
N.D.
-0.3
-0.1
+0.0
+0.3
phage
Bas09
N.D.
-0.0
-0.4
-0.6
+1.3
phage
WM_RB68
N.D.
-0.2
+0.0
+0.0
+0.4
carbon source
Casamino-acids
N.D.
-0.1
-0.1
+0.2
+0.3
phage
WM_TP9
N.D.
-0.3
-0.1
+0.4
+0.5
carbon source
Sodium-DL-Lactate
N.D.
-0.2
-0.2
+0.3
+0.6
carbon source
Casamino-acids
N.D.
+0.0
+0.0
-0.0
+0.9
phage
EV240
N.D.
-0.2
-0.5
-0.0
+1.9
phage
EV240
N.D.
-0.1
-0.4
-0.2
+1.9
phage
WM_EV240
N.D.
+0.0
-0.2
-0.2
+1.7
phage
WM_EV240
N.D.
-0.1
-0.3
+0.3
+1.4
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