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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
thiG and thiH overlap by 4 nucleotides
thiH and MCAODC_03910 are separated by 434 nucleotides
MCAODC_03910 and rpoC are separated by 212 nucleotides
rpoC and rpoB_R687H are separated by 76 nucleotides
MCAODC_03895: thiG - thiazole synthase, at 784,692 to 785,462
thiG
MCAODC_03900: thiH - 2-iminoacetate synthase ThiH, at 785,459 to 786,592
thiH
MCAODC_03910: MCAODC_03910 - stationary phase growth adaptation protein, at 787,027 to 787,470
_03910
MCAODC_03915: rpoC - DNA-directed RNA polymerase subunit beta', at 787,683 to 791,906
rpoC
MCAODC_03920: rpoB_R687H - DNA-directed RNA polymerase subunit beta RpoB, at 791,983 to 796,011
_R687H
Group
Condition
MCAODC
_03895
MCAODC
_03900
MCAODC
_03910
MCAODC
_03915
MCAODC
_03920
thiG
thiH
rpoC
rpoB_R687H
carbon source
Casamino-acids
-2.3
-0.8
-0.3
N.D.
N.D.
carbon source
Casamino-acids
-1.5
-0.8
-0.1
N.D.
N.D.
carbon source
L-Arabinose
-1.0
-0.7
+0.0
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.8
-0.4
-0.1
N.D.
N.D.
carbon source
D-Glucose
-0.8
-0.4
+0.0
N.D.
N.D.
carbon source
D-Glucose
-0.7
-0.5
-0.1
N.D.
N.D.
carbon source
L-Arabinose
-0.7
-0.6
+0.0
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.6
-0.4
+0.0
N.D.
N.D.
phage
Bas14
-0.4
-0.2
-0.1
N.D.
N.D.
phage
EV240
-0.3
-0.1
-0.1
N.D.
N.D.
phage
Bas09
-0.2
-0.2
-0.1
N.D.
N.D.
phage
EV240
-0.3
-0.1
-0.0
N.D.
N.D.
phage
TP9
-0.3
-0.1
-0.0
N.D.
N.D.
phage
Bas09
-0.4
-0.2
+0.2
N.D.
N.D.
phage
WM_Bas41
+0.1
-0.1
-0.2
N.D.
N.D.
phage
WM_TP9
+0.0
-0.1
-0.1
N.D.
N.D.
no phage control
Control_ECRC101_WM
-0.2
-0.0
+0.1
N.D.
N.D.
phage
WM_EV240
-0.0
-0.2
+0.1
N.D.
N.D.
no phage control
Control_ECRC101_WM
+0.0
-0.1
-0.1
N.D.
N.D.
phage
Bas14
-0.2
+0.1
+0.0
N.D.
N.D.
phage
WM_TP9
+0.1
-0.0
-0.1
N.D.
N.D.
phage
WM_Bas14
+0.1
+0.1
-0.1
N.D.
N.D.
phage
WM_RB68
+0.1
-0.0
+0.1
N.D.
N.D.
phage
WM_Bas09
+0.2
-0.0
+0.0
N.D.
N.D.
phage
WM_Bas09
+0.1
-0.0
+0.1
N.D.
N.D.
phage
WM_EV240
+0.3
+0.0
+0.0
N.D.
N.D.
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