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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
nudC and rsd are separated by 94 nucleotides
rsd and thiC are separated by 232 nucleotides
thiC and thiE overlap by 1 nucleotides
thiE and thiF overlap by 8 nucleotides
MCAODC_03865: nudC - NAD(+) diphosphatase, at 779,651 to 780,424
nudC
MCAODC_03870: rsd - sigma D regulator, at 780,519 to 780,995
rsd
MCAODC_03875: thiC - phosphomethylpyrimidine synthase ThiC, at 781,228 to 783,123
thiC
MCAODC_03880: thiE - thiamine phosphate synthase, at 783,123 to 783,758
thiE
MCAODC_03885: thiF - thiazole biosynthesis adenylyltransferase ThiF, at 783,751 to 784,506
thiF
Group
Condition
MCAODC
_03865
MCAODC
_03870
MCAODC
_03875
MCAODC
_03880
MCAODC
_03885
nudC
rsd
thiC
thiE
thiF
carbon source
Casamino-acids
-0.1
+0.2
-1.3
-1.2
-1.3
carbon source
L-Arabinose
-0.2
-0.0
-0.8
-1.1
-0.8
carbon source
Casamino-acids
-0.0
+0.4
-1.2
-1.0
-1.1
carbon source
D-Glucose
-0.2
-0.3
-0.5
-0.5
-0.5
carbon source
Sodium-DL-Lactate
-0.2
+0.0
-0.6
-0.6
-0.5
carbon source
L-Arabinose
+0.1
+0.3
-0.7
-0.5
-0.8
carbon source
D-Glucose
+0.0
-0.3
-0.6
-0.5
-0.4
carbon source
Sodium-DL-Lactate
+0.0
+0.2
-0.6
-0.4
-0.5
phage
EV240
-0.2
-0.2
-0.2
-0.0
-0.3
phage
Bas14
-0.2
-0.0
-0.2
-0.0
-0.1
phage
WM_EV240
-0.1
-0.2
-0.2
+0.1
+0.0
phage
EV240
+0.0
+0.0
-0.1
-0.2
-0.1
phage
Bas09
-0.0
-0.1
-0.0
+0.0
-0.2
phage
Bas09
-0.1
+0.1
+0.0
-0.1
-0.2
phage
WM_Bas41
-0.2
-0.2
-0.1
+0.1
+0.1
phage
WM_Bas09
-0.0
+0.1
-0.0
-0.1
-0.1
phage
WM_TP9
+0.0
-0.1
-0.1
+0.1
-0.0
no phage control
Control_ECRC101_WM
+0.1
+0.0
-0.2
-0.1
+0.0
phage
WM_RB68
+0.1
-0.0
-0.0
-0.0
-0.1
phage
WM_EV240
-0.3
-0.1
+0.0
+0.1
+0.2
phage
WM_TP9
+0.1
-0.0
-0.1
+0.0
+0.1
no phage control
Control_ECRC101_WM
-0.0
+0.2
-0.1
-0.0
+0.1
phage
WM_Bas09
+0.1
-0.0
-0.0
+0.1
-0.1
phage
WM_Bas14
+0.0
-0.0
+0.0
+0.1
-0.0
phage
TP9
+0.2
-0.1
+0.2
+0.0
-0.1
phage
Bas14
-0.1
+0.2
+0.1
+0.1
-0.0
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