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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
yjaH and hupA are separated by 72 nucleotides
hupA and yjaG are separated by 186 nucleotides
yjaG and nfi are separated by 42 nucleotides
nfi and hemE are separated by 9 nucleotides
MCAODC_03840: yjaH - Uncharacterized protein YjaH, at 776,066 to 776,701
yjaH
MCAODC_03845: hupA - DNA-binding protein HU-alpha, at 776,774 to 777,046
hupA
MCAODC_03850: yjaG - Uncharacterized protein YjaG, at 777,233 to 777,823
yjaG
MCAODC_03855: nfi - deoxyribonuclease V, at 777,866 to 778,537
nfi
MCAODC_03860: hemE - uroporphyrinogen decarboxylase, at 778,547 to 779,611
hemE
Group
Condition
MCAODC
_03840
MCAODC
_03845
MCAODC
_03850
MCAODC
_03855
MCAODC
_03860
yjaH
hupA
yjaG
nfi
hemE
phage
TP9
-0.0
-1.3
-0.4
-0.1
N.D.
phage
Bas09
+0.2
-1.6
-0.4
+0.0
N.D.
phage
WM_Bas41
-0.3
-0.5
-0.5
+0.0
N.D.
phage
Bas09
+0.0
-0.8
-0.4
+0.1
N.D.
carbon source
D-Glucose
-0.3
-0.9
-0.1
+0.4
N.D.
no phage control
Control_ECRC101_WM
-0.1
-0.9
+0.2
-0.1
N.D.
phage
Bas14
+0.0
-0.5
-0.4
+0.1
N.D.
phage
WM_RB68
+0.0
-0.5
-0.1
-0.0
N.D.
phage
WM_TP9
-0.3
+0.3
-0.1
-0.1
N.D.
carbon source
L-Arabinose
-0.1
+0.1
-0.1
+0.1
N.D.
phage
WM_Bas14
+0.2
-0.1
-0.2
+0.0
N.D.
carbon source
D-Glucose
-0.1
-0.1
-0.2
+0.4
N.D.
phage
WM_Bas09
+0.4
-0.2
+0.0
+0.0
N.D.
carbon source
Casamino-acids
-0.0
+0.1
+0.1
+0.1
N.D.
carbon source
Sodium-DL-Lactate
-0.1
+0.4
-0.4
+0.3
N.D.
carbon source
Sodium-DL-Lactate
-0.3
+0.2
+0.0
+0.3
N.D.
carbon source
L-Arabinose
+0.2
+0.1
-0.0
+0.2
N.D.
phage
Bas14
+0.0
+0.3
-0.3
+0.3
N.D.
no phage control
Control_ECRC101_WM
+0.1
+0.4
+0.1
-0.2
N.D.
carbon source
Casamino-acids
+0.2
+0.2
-0.0
+0.2
N.D.
phage
WM_Bas09
+0.0
+0.4
+0.1
+0.1
N.D.
phage
WM_TP9
+0.3
+0.3
-0.1
+0.1
N.D.
phage
WM_EV240
-0.0
+0.4
+0.2
+0.1
N.D.
phage
WM_EV240
+0.3
+0.9
+0.3
-0.0
N.D.
phage
EV240
+0.6
+2.3
+0.9
-0.2
N.D.
phage
EV240
+0.2
+3.0
+0.8
-0.1
N.D.
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