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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_03540 and MCAODC_03545 are separated by 612 nucleotides
MCAODC_03545 and zur are separated by 311 nucleotides
zur and yjbJ are separated by 41 nucleotides
yjbJ and dinF are separated by 115 nucleotides
MCAODC_03540: MCAODC_03540 - hypothetical protein, at 709,312 to 709,845
_03540
MCAODC_03545: MCAODC_03545 - DUF2713 domain-containing protein, at 710,458 to 711,414
_03545
MCAODC_03550: zur - zinc uptake transcriptional repressor Zur, at 711,726 to 712,241
zur
MCAODC_03555: yjbJ - UPF0337 protein YjbJ, at 712,283 to 712,492
yjbJ
MCAODC_03560: dinF - MATE family efflux transporter DinF, at 712,608 to 713,933
dinF
Group
Condition
MCAODC
_03540
MCAODC
_03545
MCAODC
_03550
MCAODC
_03555
MCAODC
_03560
zur
yjbJ
dinF
phage
WM_EV240
-0.0
-0.4
+0.3
-0.7
-0.0
phage
Bas14
-0.1
-0.2
-0.3
-0.3
+0.2
phage
TP9
+0.1
-0.3
-0.2
-0.4
+0.1
phage
WM_Bas14
-0.1
-0.3
-0.2
+0.2
-0.0
phage
WM_EV240
+0.2
-0.3
-0.0
-0.1
-0.1
phage
Bas14
-0.0
+0.3
-0.5
-0.2
+0.2
phage
Bas09
+0.2
+0.1
-0.3
-0.0
-0.1
phage
WM_Bas09
+0.1
+0.2
-0.2
-0.3
+0.1
phage
Bas09
+0.1
+0.2
-0.3
+0.0
-0.1
carbon source
L-Arabinose
+0.1
+0.2
-0.4
-0.1
+0.1
phage
WM_Bas41
+0.1
+0.4
-0.1
-0.3
-0.1
phage
WM_TP9
+0.1
-0.1
-0.1
+0.1
-0.0
phage
WM_RB68
-0.1
-0.0
-0.1
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.2
+0.2
-0.1
+0.3
-0.1
no phage control
Control_ECRC101_WM
+0.1
+0.0
-0.1
+0.0
+0.1
carbon source
D-Glucose
+0.0
+0.0
-0.3
+0.1
+0.4
phage
WM_Bas09
+0.0
+0.1
-0.3
+0.5
-0.0
phage
WM_TP9
+0.1
+0.2
-0.1
+0.2
+0.0
carbon source
Sodium-DL-Lactate
+0.2
-0.0
+0.0
+0.5
-0.2
phage
EV240
+0.3
+0.4
+0.0
-0.1
-0.1
phage
EV240
+0.2
+0.0
+0.5
+0.0
-0.3
no phage control
Control_ECRC101_WM
+0.2
+0.3
-0.1
+0.3
-0.1
carbon source
L-Arabinose
-0.1
+0.3
-0.2
+0.6
+0.0
carbon source
D-Glucose
+0.2
+0.2
-0.1
+0.4
-0.0
carbon source
Casamino-acids
-0.0
+0.5
-0.2
+0.3
+0.2
carbon source
Casamino-acids
+0.1
+0.4
+0.2
+0.2
+0.2
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