Fitness for 5 genes in Escherichia coli ECRC101

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Top 26 experiments (either direction), sorted by average fitness

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500 ntMCAODC_03505 and yfdR are separated by 127 nucleotidesyfdR and MCAODC_03515 overlap by 10 nucleotidesMCAODC_03515 and MCAODC_03520 overlap by 4 nucleotidesMCAODC_03520 and MCAODC_03525 are separated by 335 nucleotides MCAODC_03505: MCAODC_03505 - CPS-53 (KpLE1) prophage protein, at 706,063 to 706,449 _03505 MCAODC_03510: yfdR - 5'-deoxynucleotidase, at 706,577 to 707,113 yfdR MCAODC_03515: MCAODC_03515 - Eae protein, at 707,104 to 707,454 _03515 MCAODC_03520: MCAODC_03520 - SAM-dependent methyltransferase, at 707,451 to 707,735 _03520 MCAODC_03525: MCAODC_03525 - hypothetical protein, at 708,071 to 708,268 _03525
Group Condition MCAODC_03505 MCAODC_03510 MCAODC_03515 MCAODC_03520 MCAODC_03525
yfdR
phage WM_Bas09 -6.7 -0.3 -0.1 -0.1 +0.1
phage Bas14 -3.4 -0.1 -0.3 +0.3 -0.2
phage WM_Bas09 -1.1 -0.2 +0.0 -0.1 +0.0
carbon source Sodium-DL-Lactate -0.7 -0.0 -0.1 -0.1 -0.3
phage TP9 +0.1 +0.4 -0.3 -0.9 -0.2
phage WM_RB68 -0.6 -0.2 +0.1 -0.2 +0.1
no phage control Control_ECRC101_WM -0.5 -0.1 -0.0 -0.1 -0.0
phage EV240 -0.5 +0.2 -0.2 +0.2 +0.0
phage WM_Bas41 -0.2 -0.1 +0.0 +0.1 -0.1
phage WM_EV240 -0.0 -0.2 +0.3 -0.3 +0.0
phage Bas14 -0.1 -0.0 -0.1 +0.3 -0.1
carbon source D-Glucose +0.0 -0.1 +0.0 -0.1 +0.2
carbon source L-Arabinose +0.3 -0.1 -0.2 +0.2 -0.1
carbon source L-Arabinose +0.4 -0.4 +0.1 +0.2 -0.1
phage WM_TP9 +0.2 -0.3 +0.1 +0.2 -0.1
phage WM_EV240 +0.5 -0.2 +0.2 -0.2 -0.0
no phage control Control_ECRC101_WM +0.1 -0.1 +0.1 +0.2 +0.2
carbon source D-Glucose +0.4 -0.1 +0.0 +0.2 -0.1
phage EV240 +0.6 +0.1 -0.2 -0.2 +0.2
carbon source Sodium-DL-Lactate +0.9 -0.2 +0.0 +0.1 -0.1
phage Bas09 +0.6 +0.1 -0.2 +0.5 -0.1
carbon source Casamino-acids +1.1 -0.1 -0.1 +0.1 -0.1
phage WM_Bas14 +0.6 +0.0 +0.3 +0.1 +0.0
phage WM_TP9 +1.0 -0.3 +0.2 +0.2 -0.1
phage Bas09 +1.0 -0.0 -0.1 +0.6 +0.0
carbon source Casamino-acids +1.3 -0.0 +0.3 -0.0 +0.3
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