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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ssb1 and uvrA are separated by 254 nucleotides
uvrA and yjbR are separated by 34 nucleotides
yjbR and yjbQ are separated by 3 nucleotides
yjbQ and aphA are separated by 110 nucleotides
MCAODC_03400: ssb1 - single-stranded DNA-binding protein SSB1, at 686,256 to 686,792
ssb1
MCAODC_03405: uvrA - excinuclease ABC subunit UvrA, at 687,047 to 689,869
uvrA
MCAODC_03410: yjbR - Uncharacterized protein YjbR, at 689,904 to 690,260
yjbR
MCAODC_03415: yjbQ - UPF0047 protein YjbQ, at 690,264 to 690,680
yjbQ
MCAODC_03420: aphA - acid phosphatase AphA, at 690,791 to 691,504
aphA
Group
Condition
MCAODC
_03400
MCAODC
_03405
MCAODC
_03410
MCAODC
_03415
MCAODC
_03420
ssb1
uvrA
yjbR
yjbQ
aphA
phage
TP9
N.D.
-0.1
-0.2
-0.3
+0.0
phage
WM_EV240
N.D.
-0.3
+0.1
-0.2
-0.0
phage
Bas14
N.D.
+0.1
-0.1
-0.3
-0.0
phage
WM_Bas09
N.D.
+0.0
-0.1
-0.0
-0.1
phage
WM_TP9
N.D.
-0.2
+0.0
-0.0
+0.0
phage
WM_TP9
N.D.
-0.2
-0.1
-0.1
+0.2
phage
WM_Bas41
N.D.
+0.0
+0.0
-0.3
+0.2
no phage control
Control_ECRC101_WM
N.D.
+0.0
-0.1
-0.1
+0.1
carbon source
Sodium-DL-Lactate
N.D.
-0.2
+0.2
-0.0
+0.0
phage
WM_Bas09
N.D.
-0.0
+0.1
+0.1
-0.2
carbon source
Sodium-DL-Lactate
N.D.
-0.1
+0.2
+0.1
-0.2
carbon source
Casamino-acids
N.D.
+0.0
-0.1
+0.2
-0.1
phage
Bas14
N.D.
+0.1
-0.2
-0.1
+0.2
phage
WM_EV240
N.D.
-0.1
+0.4
-0.2
-0.0
no phage control
Control_ECRC101_WM
N.D.
-0.0
-0.2
+0.1
+0.3
phage
WM_RB68
N.D.
+0.0
-0.1
+0.2
+0.1
carbon source
D-Glucose
N.D.
-0.2
+0.1
+0.2
+0.2
phage
Bas09
N.D.
+0.1
-0.1
-0.0
+0.3
carbon source
L-Arabinose
N.D.
-0.2
+0.2
+0.2
+0.1
phage
WM_Bas14
N.D.
+0.1
-0.1
+0.1
+0.2
phage
Bas09
N.D.
+0.1
+0.1
-0.1
+0.2
carbon source
L-Arabinose
N.D.
-0.1
-0.1
+0.2
+0.3
carbon source
D-Glucose
N.D.
-0.0
+0.1
+0.2
+0.1
phage
EV240
N.D.
-0.1
+0.1
+0.0
+0.4
phage
EV240
N.D.
-0.2
-0.0
-0.1
+0.7
carbon source
Casamino-acids
N.D.
-0.0
+0.6
-0.1
+0.0
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