Fitness for 5 genes in Escherichia coli ECRC101

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500 ntnrfC and nrfB overlap by 4 nucleotidesnrfB and nrfA are separated by 44 nucleotidesnrfA and ytcB are separated by 96 nucleotidesytcB and acs are separated by 239 nucleotides MCAODC_03320: nrfC - cytochrome c nitrite reductase Fe-S protein, at 670,437 to 671,108 nrfC MCAODC_03325: nrfB - cytochrome c nitrite reductase pentaheme subunit, at 671,105 to 671,671 nrfB MCAODC_03330: nrfA - ammonia-forming nitrite reductase cytochrome c552 subunit, at 671,716 to 673,152 nrfA MCAODC_03335: ytcB - Protein YtcB, at 673,249 to 673,305 ytcB MCAODC_03340: acs - acetate--CoA ligase, at 673,545 to 675,503 acs
Group Condition MCAODC_03320 MCAODC_03325 MCAODC_03330 MCAODC_03335 MCAODC_03340
nrfC nrfB nrfA ytcB acs
phage WM_EV240 -0.5 -0.0 -0.1 N.D. -0.3
phage WM_Bas41 -0.3 -0.2 +0.2 N.D. -0.1
phage Bas14 -0.4 +0.1 -0.1 N.D. +0.1
no phage control Control_ECRC101_WM -0.0 -0.2 -0.1 N.D. -0.0
carbon source L-Arabinose -0.1 +0.1 -0.2 N.D. -0.0
phage Bas09 -0.4 +0.0 -0.0 N.D. +0.1
carbon source L-Arabinose -0.3 +0.0 +0.1 N.D. -0.0
phage WM_TP9 -0.3 +0.1 +0.0 N.D. +0.0
phage TP9 -0.2 -0.0 -0.0 N.D. +0.1
phage Bas09 -0.3 -0.0 +0.0 N.D. +0.1
carbon source Sodium-DL-Lactate +0.0 -0.0 -0.2 N.D. +0.0
carbon source D-Glucose -0.0 -0.2 +0.1 N.D. -0.1
phage WM_Bas09 -0.5 +0.3 +0.1 N.D. -0.0
carbon source Casamino-acids +0.3 -0.3 +0.1 N.D. -0.1
phage WM_RB68 -0.0 +0.0 -0.0 N.D. +0.0
carbon source D-Glucose -0.0 +0.1 -0.2 N.D. +0.1
phage WM_TP9 -0.1 +0.2 -0.0 N.D. +0.0
no phage control Control_ECRC101_WM +0.1 +0.1 -0.1 N.D. +0.0
phage WM_EV240 +0.2 +0.0 -0.2 N.D. +0.0
carbon source Sodium-DL-Lactate +0.2 +0.1 -0.0 N.D. -0.0
phage WM_Bas09 -0.1 +0.3 +0.1 N.D. -0.0
phage WM_Bas14 +0.3 +0.1 -0.1 N.D. +0.1
carbon source Casamino-acids +0.4 +0.1 -0.0 N.D. -0.2
phage Bas14 +0.3 -0.1 +0.1 N.D. +0.2
phage EV240 +0.3 +0.3 -0.0 N.D. +0.1
phage EV240 +0.6 +0.3 -0.1 N.D. +0.1
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